RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CTSHP09668 335 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 GALCP54803 685 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 NT5DC1Q5TFE4 455 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 MEI1Q5TIA1 1274 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 TBC1D1Q86TI0 1168 aaPredicted RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 THG1LQ9NWX6 298 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 EIF3HO15372 352 aaKnown RBP eCLIP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ZW10O43264 779 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 CCDC22O60826 627 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 MED24O75448 989 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 HOXB8P17481 243 aaPredicted RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ADORA2AP29274 412 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 LAMTOR4Q0VGL1 99 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 GPS1Q13098 491 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 CASP8Q14790 479 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PID1Q7Z2X4 250 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 SUGP1Q8IWZ8 645 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PDZD8Q8NEN9 1154 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ULK4Q96C45 1275 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 DRG1Q9Y295 367 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 FAM237AA0A1B0GTK4 181 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ADCY3O60266 1144 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ALDH2P05091 517 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 HADHAP40939 763 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 TUFMP49411 452 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PKN1Q16512 942 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 CELF3Q5SZQ8 465 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PRUNE1Q86TP1 453 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 BRSK2Q8IWQ3 736 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ADGRF2Q8IZF7 708 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 SLC35G2Q8TBE7 412 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ELOVL4Q9GZR5 314 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 SLC25A13Q9UJS0 675 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PLAGL2Q9UPG8 496 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 GLTPD2A6NH11 291 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 NVLO15381 856 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 HIST1H2AGP0C0S8 130 aaPredicted RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 HIST1H2ADP20671 130 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 CNTFP26441 200 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 FSCN1Q16658 493 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 MGAT5BQ3V5L5 792 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 GPAT2Q6NUI2 795 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 MAP4K3Q8IVH8 894 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 EEF2KMTQ96G04 330 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 HIST1H2AHQ96KK5 128 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 HIST1H2AJQ99878 128 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 H2AFJQ9BTM1 129 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 RUSC1Q9BVN2 902 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 SPATA16Q9BXB7 569 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 UBXN6Q9BZV1 441 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 YY1AP1Q9H869 796 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PDE11AQ9HCR9 933 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 ZCCHC17Q9NP64 241 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 SMYD2Q9NRG4 433 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 RWDD3Q9Y3V2 267 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 PCDHB5Q9Y5E4 795 aa9.69□□□□□ -0.86
PPFIA2-216ENST00000549396 CNTNAP2Q9UHC6 1331 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 NPHP3-ACAD11A0A0J9YXS1 232 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 F5H5T6 163 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 POU5F1Q01860 360 aaKnown RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 MAPK8IP2Q13387 824 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ART3Q13508 389 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 TTLL9Q3SXZ7 439 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 C17orf53Q8N3J3 647 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 WNK4Q96J92 1243 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 SPON2Q9BUD6 331 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 AP1M1Q9BXS5 423 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 STN1Q9H668 368 aaKnown RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 FAM198AQ9UFP1 575 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 SLC30A1Q9Y6M5 507 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 CCDC160A6NGH7 325 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 RNASEH1O60930 286 aaKnown RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ARP10275 920 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ZNF177Q13360 481 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 FAM110CQ1W6H9 321 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 C11orf63Q6NUN7 778 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 CCDC149Q6ZUS6 474 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 OTOP1Q7RTM1 612 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 VSIG10LQ86VR7 867 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 CXorf38Q8TB03 319 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 TINF2Q9BSI4 451 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 TLR8Q9NR97 1041 aaKnown RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 DNPEPQ9ULA0 475 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ITGB3P05106 788 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 PPM1AP35813 382 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 PSEN1P49768 467 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ITGA9Q13797 1035 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 VGLL4Q14135 290 aa9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 ZNF268Q14587 947 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 POLD3Q15054 466 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 EPM2AIP1Q7L775 607 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-216ENST00000549396 NLRP9Q7RTR0 991 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms