RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 AGAP1Q9UPQ3 857 aa20.11■□□□□ 0.81
CHMP1A-207ENST00000549328 UBE4BO95155 1302 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 MOSPD3O75425 235 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 ITGB3P05106 788 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 POLR2BP30876 1174 aaKnown RBP20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 TUFMP49411 452 aaKnown RBP20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 TANGO2Q6ICL3 276 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 CXorf38Q8TB03 319 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 ATOH1Q92858 354 aaPredicted RBP20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 ASB16Q96NS5 453 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 LRRC3Q9BY71 257 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 DNAJC25Q9H1X3 360 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 ZFP14Q9HCL3 533 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 SLC27A5Q9Y2P5 690 aa20.1■□□□□ 0.81
CHMP1A-207ENST00000549328 TSC2P49815 1807 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 SLFN14P0C7P3 912 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 MYL4P12829 197 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 RBP5P82980 135 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 PRKCQQ04759 706 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 SLC39A12Q504Y0 691 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 SLC44A4Q53GD3 710 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 FAM78AQ5JUQ0 283 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 CEP57L1Q8IYX8 460 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 CSGALNACT2Q8N6G5 542 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 DTWD2Q8NBA8 298 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 NOC3LQ8WTT2 800 aaKnown RBP20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 SMARCD2Q92925 531 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 PSMG2Q969U7 264 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 INTS13Q9NVM9 706 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 GDAP2Q9NXN4 497 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 HSPBP1Q9NZL4 362 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 SIT1Q9Y3P8 196 aa20.09■□□□□ 0.81
CHMP1A-207ENST00000549328 TULP1O00294 542 aaPredicted RBP20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 TGFB1I1O43294 461 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 HUS1O60921 280 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 FGF19O95750 216 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 TMEM191BP0C7N4 346 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 FCARP24071 287 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 DNAJB7Q7Z6W7 309 aaPredicted RBP20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 ITIH5Q86UX2 942 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 TMC8Q8IU68 726 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 DCP1BQ8IZD4 617 aaKnown RBP20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 TMEM86AQ8N2M4 240 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 SPATA18Q8TC71 538 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 SPPL2BQ8TCT7 592 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 SCFD1Q8WVM8 642 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 ANKRD36BP1Q96IX9 119 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 PHOX2BQ99453 314 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 DDX23Q9BUQ8 820 aaKnown RBP20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 PLA2G2FQ9BZM2 168 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 BLZF1Q9H2G9 400 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 TRPV4Q9HBA0 871 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 AGPAT3Q9NRZ7 376 aa20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 CGNQ9P2M7 1197 aaKnown RBP20.08■□□□□ 0.81
CHMP1A-207ENST00000549328 TCHHQ07283 1943 aa20.08■□□□□ 0.8
CHMP1A-207ENST00000549328 CMA1P23946 247 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 AFMP43652 599 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 KRT85P78386 507 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 SNW1Q13573 536 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 MLF2Q15773 248 aaPredicted RBP20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 DUOXA2Q1HG44 320 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 BMT2Q1RMZ1 405 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 HS2ST1Q7LGA3 356 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 LRRTM3Q86VH5 581 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 CBWD2Q8IUF1 395 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 PDCL2Q8N4E4 241 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 TTC9BQ8N6N2 239 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 SHKBP1Q8TBC3 707 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 ZSWIM3Q96MP5 696 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 MTMR12Q9C0I1 747 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 USP25Q9UHP3 1055 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 SIX4Q9UIU6 781 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 R3HCC1Q9Y3T6 440 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-207ENST00000549328 KANSL1LA0AUZ9 987 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 NRG2O14511 850 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 TNNC2P02585 160 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 KRT19P08727 400 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 GJA1P17302 382 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 CASP1P29466 404 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 TSPY1Q01534 308 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 CUL4BQ13620 913 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 VEPH1Q14D04 833 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 TEAD2Q15562 447 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 NFE2Q16621 373 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 DPH6Q7L8W6 267 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 WDR49Q8IV35 697 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 PJA1Q8NG27 643 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 ZSCAN18Q8TBC5 510 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 LEO1Q8WVC0 666 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 DNASE1L2Q92874 299 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 E2F7Q96AV8 911 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 SPATA32Q96LK8 384 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 ACBD6Q9BR61 282 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 TRMT61BQ9BVS5 477 aaKnown RBP20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 OSBPL6Q9BZF3 934 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 FAM86C1Q9NVL1 165 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 DLGAP2Q9P1A6 1054 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 SERTAD1Q9UHV2 236 aa20.06■□□□□ 0.8
CHMP1A-207ENST00000549328 L1RE1Q9UN81 338 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms