RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
SSH1-208ENST00000548522 E2F7Q96AV8 911 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 SENP8Q96LD8 212 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 REEP2Q9BRK0 252 aa17.87■□□□□ 0.45
SSH1-208ENST00000548522 C8orf33Q9H7E9 229 aaPredicted RBP17.87■□□□□ 0.45
SSH1-208ENST00000548522 SH2B1Q9NRF2 756 aaPredicted RBP17.87■□□□□ 0.45
SSH1-208ENST00000548522 TISP43B9A030 160 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 SLC30A4O14863 429 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 PAPSS2O95340 614 aaPredicted RBP17.86■□□□□ 0.45
SSH1-208ENST00000548522 ADRB1P08588 477 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 TYMPP19971 482 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 MLLT6P55198 1093 aaPredicted RBP17.86■□□□□ 0.45
SSH1-208ENST00000548522 CCINQ13939 588 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 MYBPC2Q14324 1141 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 PPM1JQ5JR12 505 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 SPATA1Q5VX52 437 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 LONP2Q86WA8 852 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 NETO1Q8TDF5 533 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 MSANTD3Q96H12 275 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 ZSCAN31Q96LW9 406 aaPredicted RBP17.86■□□□□ 0.45
SSH1-208ENST00000548522 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
SSH1-208ENST00000548522 OXCT2Q9BYC2 517 aaPredicted RBP17.86■□□□□ 0.45
SSH1-208ENST00000548522 IL21Q9HBE4 155 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 TBX20Q9UMR3 447 aa17.86■□□□□ 0.45
SSH1-208ENST00000548522 K7ENM7 598 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 OGTO15294 1046 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 EXTL3O43909 919 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 ADRB2P07550 413 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 ODC1P11926 461 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 PXNP49023 591 aaPredicted RBP17.85■□□□□ 0.45
SSH1-208ENST00000548522 SLC39A12Q504Y0 691 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 C9orf57Q5W0N0 161 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 RALGPS2Q86X27 583 aaPredicted RBP17.85■□□□□ 0.45
SSH1-208ENST00000548522 FAM160A2Q8N612 972 aaPredicted RBP17.85■□□□□ 0.45
SSH1-208ENST00000548522 CHFRQ96EP1 664 aa17.85■□□□□ 0.45
SSH1-208ENST00000548522 RPF1Q9H9Y2 349 aaKnown RBP17.85■□□□□ 0.45
SSH1-208ENST00000548522 A0A0B4J269 797 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 DPYSL4O14531 572 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 PIGRP01833 764 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 KCNA4P22459 653 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 DHX8Q14562 1220 aaKnown RBP17.84■□□□□ 0.45
SSH1-208ENST00000548522 CCDC6Q16204 474 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 CSRP2Q16527 193 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 ARHGAP29Q52LW3 1261 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 GPBP1Q86WP2 473 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 STKLD1Q8NE28 680 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 RIN3Q8TB24 985 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 FAM200AQ8TCP9 573 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 GIPC2Q8TF65 315 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 CDK5RAP3Q96JB5 506 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 MSTO1Q9BUK6 570 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 IKZF4Q9H2S9 585 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 POLR3BQ9NW08 1133 aaPredicted RBP17.84■□□□□ 0.45
SSH1-208ENST00000548522 KCND2Q9NZV8 630 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 LARSQ9P2J5 1176 aaKnown RBP17.84■□□□□ 0.45
SSH1-208ENST00000548522 CPSF3Q9UKF6 684 aaKnown RBP17.84■□□□□ 0.45
SSH1-208ENST00000548522 ASB3Q9Y575 518 aa17.84■□□□□ 0.45
SSH1-208ENST00000548522 LAMA1P25391 3075 aa17.83■□□□□ 0.45
SSH1-208ENST00000548522 OTOL1A6NHN0 477 aaPredicted RBP17.83■□□□□ 0.44
SSH1-208ENST00000548522 LRP3O75074 770 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 NMT1P30419 496 aaKnown RBP17.83■□□□□ 0.44
SSH1-208ENST00000548522 MGAT5BQ3V5L5 792 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 DGKKQ5KSL6 1271 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 ARMCX5Q6P1M9 558 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 C1orf228Q6PIY5 440 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 BPIFB1Q8TDL5 484 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 KCNN1Q92952 543 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 FIZ1Q96SL8 496 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 SLC46A2Q9BY10 475 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 ZCWPW1Q9H0M4 648 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 TASP1Q9H6P5 420 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 RXFP3Q9NSD7 469 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 CCL26Q9Y258 94 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 FRYQ5TBA9 3013 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 CEP295Q9C0D2 2601 aa17.83■□□□□ 0.44
SSH1-208ENST00000548522 NUP210Q8TEM1 1887 aaPredicted RBP17.82■□□□□ 0.44
SSH1-208ENST00000548522 ANO9A1A5B4 782 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 ANKRD63C9JTQ0 380 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 PIRO00625 290 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
SSH1-208ENST00000548522 ACOT2P49753 483 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 ZNF131P52739 623 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 GRIN1Q05586 938 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 TMEM132DQ14C87 1099 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 SF3A2Q15428 464 aaKnown RBP17.82■□□□□ 0.44
SSH1-208ENST00000548522 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 NAIF1Q69YI7 327 aaPredicted RBP17.82■□□□□ 0.44
SSH1-208ENST00000548522 TRIM68Q6AZZ1 485 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 CEP68Q76N32 757 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 TMEM150AQ86TG1 271 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 ITIH5Q86UX2 942 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 LRRTM3Q86VH5 581 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 MYCT1Q8N699 235 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 HPS4Q9NQG7 708 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 BLOC1S4Q9NUP1 217 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 OBP2AQ9NY56 170 aa17.82■□□□□ 0.44
SSH1-208ENST00000548522 KCNG1Q9UIX4 513 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms