RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 FERMT3Q86UX7 667 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 YAF2Q8IY57 180 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.04
PTCH1-217ENST00000548420 MTRQ99707 1265 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 CXCL16Q9H2A7 254 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 NXF3Q9H4D5 531 aaKnown RBP15.33■□□□□ 0.04
PTCH1-217ENST00000548420 KLK14Q9P0G3 267 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 ARID2Q68CP9 1835 aa15.33■□□□□ 0.04
PTCH1-217ENST00000548420 CASTOR2A6NHX0 329 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 ATG13O75143 517 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 EGFP01133 1207 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 LRG1P02750 347 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 MXD4Q14582 209 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-217ENST00000548420 HAUS3Q68CZ6 603 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 SRGAP1Q7Z6B7 1085 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-217ENST00000548420 MMTAG2Q9BU76 263 aaKnown RBP15.32■□□□□ 0.04
PTCH1-217ENST00000548420 NUSAP1Q9BXS6 441 aaKnown RBP15.32■□□□□ 0.04
PTCH1-217ENST00000548420 RAB34Q9BZG1 259 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 TPSD1Q9BZJ3 242 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 CEP72Q9P209 647 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 GIT1Q9Y2X7 761 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 PCDH15Q96QU1 1955 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 DOPEY2Q9Y3R5 2298 aa15.32■□□□□ 0.04
PTCH1-217ENST00000548420 SPTAN1Q13813 2472 aaKnown RBP15.32■□□□□ 0.04
PTCH1-217ENST00000548420 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
PTCH1-217ENST00000548420 SH3BP5O60239 455 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 FGFR3P22607 806 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 CCT6AP40227 531 aaKnown RBP15.31■□□□□ 0.04
PTCH1-217ENST00000548420 DGKEP52429 567 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 GRIK3Q13003 919 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 HYIQ5T013 277 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 SHKBP1Q8TBC3 707 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 CPB2Q96IY4 423 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 DCBLD2Q96PD2 775 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 MTMR6Q9Y217 621 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 ZMYM2Q9UBW7 1377 aa15.31■□□□□ 0.04
PTCH1-217ENST00000548420 TRABD2BA6NFA1 517 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 MAP3K13O43283 966 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 ABLIM3O94929 683 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 APBB3O95704 486 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 MYL4P12829 197 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 COL5A1P20908 1838 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-217ENST00000548420 PTGER3P43115 390 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 EPHA5P54756 1037 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 PTENP60484 403 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 ROR1Q01973 937 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 RESTQ13127 1097 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 STXBP5Q5T5C0 1151 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-217ENST00000548420 SLC23A3Q6PIS1 610 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 EZH1Q92800 747 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-217ENST00000548420 NFKBIZQ9BYH8 718 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-217ENST00000548420 MYO16Q9Y6X6 1858 aa15.3■□□□□ 0.04
PTCH1-217ENST00000548420 KIAA1549LQ6ZVL6 1849 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 MUC22E2RYF6 1773 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 ATXN2Q99700 1313 aaKnown RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 VPS37CA5D8V6 355 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 OTOL1A6NHN0 477 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 PP2D1A8MPX8 630 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 TSPAN1O60635 241 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 BMP15O95972 392 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 SRGAP2CP0DJJ0 459 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 CYP11B2P19099 503 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 GLRA2P23416 452 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 CDC25AP30304 524 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 TUSC3Q13454 348 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 CAMK2BQ13554 666 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 DMC1Q14565 340 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 PCBP1Q15365 356 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 CYP4A22Q5TCH4 519 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 ARMCX6Q7L4S7 300 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 SYT13Q7L8C5 426 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 ARID3BQ8IVW6 561 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 TMEFF1Q8IYR6 380 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 HDDC3Q8N4P3 179 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 KCTD17Q8N5Z5 321 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 RNF149Q8NC42 400 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 ZNF461Q8TAF7 563 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 E2F7Q96AV8 911 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 GTPBP2Q9BX10 602 aaKnown RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 POLMQ9NP87 494 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 DDX19AQ9NUU7 478 aaKnown RBP15.29■□□□□ 0.04
PTCH1-217ENST00000548420 KIAA1024Q9UPX6 916 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 INSL5Q9Y5Q6 135 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 BACE2Q9Y5Z0 518 aa15.29■□□□□ 0.04
PTCH1-217ENST00000548420 HELZP42694 1942 aaKnown RBP15.28■□□□□ 0.04
PTCH1-217ENST00000548420 TRDMT1O14717 391 aaKnown RBP15.28■□□□□ 0.04
PTCH1-217ENST00000548420 STX6O43752 255 aa15.28■□□□□ 0.04
PTCH1-217ENST00000548420 USO1O60763 962 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms