RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC39A12Q504Y0 691 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 ARHGAP15Q53QZ3 475 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 ARSHQ5FYA8 562 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 PRR23CQ6ZRP0 262 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 LONP2Q86WA8 852 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 FAM160A2Q8N612 972 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 TTC16Q8NEE8 873 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 BEST2Q8NFU1 509 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 POLR3BQ9NW08 1133 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 LARSQ9P2J5 1176 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
TRAFD1-205ENST00000548277 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 MYO16Q9Y6X6 1858 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 K7ENM7 598 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 SLC30A4O14863 429 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 HNRNPDLO14979 420 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 EXTL3O43909 919 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 PRAMEF12O95522 483 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 ADRB1P08588 477 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 CYP3A5P20815 502 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 ACOT2P49753 483 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 NCKAP1LP55160 1127 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 LILRA4P59901 499 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 FCHO2Q0JRZ9 810 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 SF3A2Q15428 464 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 PKN3Q6P5Z2 889 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 RALGPS2Q86X27 583 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 STKLD1Q8NE28 680 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 OR10T2Q8NGX3 314 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 NETO1Q8TDF5 533 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 BPIFB1Q8TDL5 484 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 PSMG2Q969U7 264 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 MSTO1Q9BUK6 570 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 ARRDC1-AS1Q9H2J1 176 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 GKN1Q9NS71 199 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 TBX20Q9UMR3 447 aa12.96□□□□□ -0.33
TRAFD1-205ENST00000548277 THADAQ6YHU6 1953 aa12.96□□□□□ -0.34
TRAFD1-205ENST00000548277 ABCA7Q8IZY2 2146 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 NUP205Q92621 2012 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 OGTO15294 1046 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 FAM13AO94988 1023 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 KRT18P05783 430 aaKnown RBP12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 NFICP08651 508 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 ODC1P11926 461 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 TYMPP19971 482 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 ATP2C1P98194 919 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 MYBPC2Q14324 1141 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 CSRP2Q16527 193 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 SPATA1Q5VX52 437 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 TRIM68Q6AZZ1 485 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 ITIH5Q86UX2 942 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 REEP2Q9BRK0 252 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 SLC46A2Q9BY10 475 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 OXCT2Q9BYC2 517 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 SMOC1Q9H4F8 434 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
TRAFD1-205ENST00000548277 TISP43B9A030 160 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 ANKRD63C9JTQ0 380 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 CYB561D2O14569 222 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 ATF6P18850 670 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 NMT1P30419 496 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 TUFMP49411 452 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 MLLT6P55198 1093 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 MCM6Q14566 821 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 ITPRIPL2Q3MIP1 535 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 AASDHQ4L235 1098 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 HYIQ5T013 277 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 SLC39A4Q6P5W5 647 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 LRRTM3Q86VH5 581 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 MAB21L3Q8N8X9 362 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 GCNAQ96QF7 691 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 IKZF4Q9H2S9 585 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 EBF3Q9H4W6 596 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 RXFP3Q9NSD7 469 aa12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 THG1LQ9NWX6 298 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 ABI2Q9NYB9 513 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 MAGED2Q9UNF1 606 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-205ENST00000548277 H0YCG3 227 aa12.93□□□□□ -0.34
TRAFD1-205ENST00000548277 H3BQV1 296 aa12.93□□□□□ -0.34
TRAFD1-205ENST00000548277 PIRO00625 290 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms