RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 CNTN6Q9UQ52 1028 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 PCDHB4Q9Y5E5 795 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 PCDHB2Q9Y5E7 798 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TDRD15B5MCY1 1934 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CLGNO14967 610 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 ZEB2O60315 1214 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CYP1A1P04798 512 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM191BP0C7N4 346 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 UNGP13051 313 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 RAG1P15918 1043 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TNFRSF8P28908 595 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 GNA15P30679 374 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF132P52740 706 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 ACLYP53396 1101 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 EPHB4P54760 987 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 BPIFB4P59827 614 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 MYL6P60660 151 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 OSTNP61366 133 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TNNC1P63316 161 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 KCNA10Q16322 511 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 DGKDQ16760 1214 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 MARCH8Q5T0T0 291 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 IQSEC1Q6DN90 963 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM270Q6UE05 265 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 HDXQ7Z353 690 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 KLHDC9Q8NEP7 349 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CPB2Q96IY4 423 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 KRT12Q99456 494 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 CDX2Q99626 313 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
CCDC65-203ENST00000547861 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 STARD7Q9NQZ5 370 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 TMEM39AQ9NV64 488 aa8.63□□□□□ -1.03
CCDC65-203ENST00000547861 SPTBN5Q9NRC6 3674 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MYO9BQ13459 2157 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MYADML2A6NDP7 307 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 KIAA0355O15063 1070 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 B4GALT4O60513 344 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 CSDE1O75534 798 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 HEXIM1O94992 359 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 IL18RAPO95256 599 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 TNNC2P02585 160 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 NFICP08651 508 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MCF2P10911 925 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 TMOD1P28289 359 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MARCKSL1P49006 195 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 NOMO3P69849 1222 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 TFAMQ00059 246 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 TNFAIP2Q03169 654 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 CENPCQ03188 943 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 FAAP100Q0VG06 881 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MESDQ14696 234 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 CASP8Q14790 479 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 DUOXA2Q1HG44 320 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF699Q32M78 642 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 GLE1Q53GS7 698 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 NAA35Q5VZE5 725 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 SCARA5Q6ZMJ2 495 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 TRIM72Q6ZMU5 477 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MON1BQ7L1V2 547 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 CPNE8Q86YQ8 564 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 MCOLN2Q8IZK6 566 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 AENQ8WTP8 325 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 NLRP7Q8WX94 980 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 ALG3Q92685 438 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 ANKRD36BP1Q96IX9 119 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 BTBD6Q96KE9 485 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 RNPC3Q96LT9 517 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 UBXN6Q9BZV1 441 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 CARD9Q9H257 536 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 RPF1Q9H9Y2 349 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 AVENQ9NQS1 362 aaPredicted RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 UVRAGQ9P2Y5 699 aa8.62□□□□□ -1.03
CCDC65-203ENST00000547861 CNOT8Q9UFF9 292 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 ZNF638Q14966 1978 aaKnown RBP8.62□□□□□ -1.03
CCDC65-203ENST00000547861 TSC2P49815 1807 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TTC28Q96AY4 2481 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 ZSCAN5CA6NGD5 496 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 MOXD2PA6NHM9 499 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 DCDC2CA8MYV0 355 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 MIF4GDA9UHW6 222 aaKnown RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 THAP12O43422 761 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 RAD51CO43502 376 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TSPAN1O60635 241 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 F2P00734 622 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 CST3P01034 146 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 CFHP08603 1231 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 C6orf222P0C671 652 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 STAG3L1P0CL83 205 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 ARF4P18085 180 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 COMTP21964 271 aa8.61□□□□□ -1.03
CCDC65-203ENST00000547861 SSTR3P32745 418 aaPredicted RBP8.61□□□□□ -1.03
CCDC65-203ENST00000547861 TNNT3P45378 269 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms