RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RABGGTAQ92696 567 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 TNIP3Q96KP6 325 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 GDF15Q99988 308 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 SDCBP2Q9H190 292 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 PCDH10Q9P2E7 1040 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 L1RE1Q9UN81 338 aa16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 MRPL42Q9Y6G3 142 aaKnown RBP16.9■□□□□ 0.3
TRAFD1-203ENST00000547063 CYP26A1O43174 497 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 PCSK1P29120 753 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 CLCN1P35523 988 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 BRCC3P46736 316 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 RAP1GAPP47736 663 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 ZNF132P52740 706 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 NDST1P52848 882 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 SHHQ15465 462 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 WSCD1Q658N2 575 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 FUT10Q6P4F1 479 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 WDR59Q6PJI9 974 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 CD300LGQ6UXG3 332 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 CCDC170Q8IYT3 715 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 THEM5Q8N1Q8 247 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 COLGALT1Q8NBJ5 622 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 HASPINQ8TF76 798 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 TMEM169Q96HH4 297 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 TMEM176AQ96HP8 235 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 IGSF21Q96ID5 467 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 CCDC42Q96M95 316 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 DEF6Q9H4E7 631 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 SPG21Q9NZD8 308 aa16.89■□□□□ 0.29
TRAFD1-203ENST00000547063 A8MXQ7 604 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 H0YGN5 161 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 GABRDO14764 452 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 MED7O43513 233 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 ITGB1P05556 798 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 PNMA6AP0CW24 399 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 GNA15P30679 374 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 BMP8BP34820 402 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 CYLC1P35663 651 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 STILQ15468 1287 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 C9orf50Q5SZB4 431 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 HGSNATQ68CP4 663 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 OVOS1Q6IE37 1185 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 KBTBD7Q8WVZ9 684 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 CLP1Q92989 425 aaKnown RBP16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 MRPL45Q9BRJ2 306 aaKnown RBP16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 OXCT2Q9BYC2 517 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 HAUS4Q9H6D7 363 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
TRAFD1-203ENST00000547063 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 VDRP11473 427 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 SKILP12757 684 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 CYP11B1P15538 503 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 RAD23BP54727 409 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 KRT17Q04695 432 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 YWHAHQ04917 246 aaPredicted RBP16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 E4F1Q66K89 784 aaPredicted RBP16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 CRYBG2Q8N1P7 616 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 SLC39A11Q8N1S5 342 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 EPS8L1Q8TE68 723 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 NHEJ1Q9H9Q4 299 aaPredicted RBP16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 HCSTQ9UBK5 93 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 PCDHA11Q9Y5I1 949 aa16.87■□□□□ 0.29
TRAFD1-203ENST00000547063 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 H7C4K7 107 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 I3L4J1 428 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 AKR1B10O60218 316 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 OAZ2O95190 189 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 CD19P15391 556 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 TNFAIP3P21580 790 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 FGFR3P22607 806 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 CDR2Q01850 454 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 BMS1Q14692 1282 aaKnown RBP16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 USP41Q3LFD5 358 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 ZNF394Q53GI3 561 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 SGO2Q562F6 1265 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 FAM171A1Q5VUB5 890 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 PPP1R2P3Q6NXS1 205 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 SLC47A2Q86VL8 602 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 TMEM139Q8IV31 216 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 SLC4A11Q8NBS3 891 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 WHAMMQ8TF30 809 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 HEXIM2Q96MH2 286 aaKnown RBP16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 SAMD11Q96NU1 681 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 AGPAT1Q99943 283 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 ACBD6Q9BR61 282 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 PLVAPQ9BX97 442 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 PUF60Q9UHX1 559 aaKnown RBP16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
TRAFD1-203ENST00000547063 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 F8W810 466 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 THAP12O43422 761 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 IGFBP6P24592 240 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 EIF4A3P38919 411 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 PBX3P40426 434 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms