RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ZNF720Q7Z2F6 126 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 NCLNQ969V3 563 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 PPP1R36Q96LQ0 422 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 MAGEB5Q9BZ81 275 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 IL17RBQ9NRM6 502 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 AIM2O14862 343 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 INPP1P49441 399 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 COPAP53621 1224 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 Q3C1V9 767 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 MTDHQ86UE4 582 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CBWD2Q8IUF1 395 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 TTLL6Q8N841 843 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 ZKSCAN4Q969J2 545 aaPredicted RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 NIF3L1Q9GZT8 377 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 SLC24A2Q9UI40 661 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 SYCE1LA8MT33 242 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CALB2P22676 271 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 NME3Q13232 169 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CUL2Q13617 745 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 Q4G0T1 1027 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 MIIPQ5JXC2 388 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 TMA16Q96EY4 203 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CBWD1Q9BRT8 395 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 ZNF711Q9Y462 761 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CDY2AQ9Y6F7 541 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 CDY1Q9Y6F8 540 aa12.79□□□□□ -0.36
NPC1L1-204ENST00000546276 STAT5BP51692 787 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 TATDN2Q93075 761 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 MRPL1Q9BYD6 325 aaKnown RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 KLRC4O43908 158 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 MYBPC2Q14324 1141 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 KYAT1Q16773 422 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 FBXO36Q8NEA4 188 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 SPATA20Q8TB22 786 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 SLC35C1Q96A29 364 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 ACSF2Q96CM8 615 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 RPAP3Q9H6T3 665 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 LOC100653049A0A140TA62 436 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 KRT34O76011 436 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 PROSCO94903 275 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 RRM1P23921 792 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 BAATQ14032 418 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 MROH9Q5TGP6 573 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 RNF135Q8IUD6 432 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 THAP11Q96EK4 314 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 EIF2AQ9BY44 585 aaKnown RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 AURKCQ9UQB9 309 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 SNX2O60749 519 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 SPRP35270 261 aaPredicted RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 PRKCEQ02156 737 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 INPP5AQ14642 412 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 WASHC2DQ5SRD0 308 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 TMTC4Q5T4D3 741 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 EXD1Q8NHP7 514 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 C17orf75Q9HAS0 396 aa12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 REXO2Q9Y3B8 237 aaKnown RBP12.78□□□□□ -0.36
NPC1L1-204ENST00000546276 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 NR3C2P08235 984 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 MYL2P10916 166 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 RGS7P49802 495 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 ARHGDIAP52565 204 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 CYLC2Q14093 348 aaPredicted RBP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 SETD3Q86TU7 594 aaPredicted RBP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 PRPF31Q8WWY3 499 aaKnown RBP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 LPAR1Q92633 364 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 HIC2Q96JB3 615 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 PAFAH2Q99487 392 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 AP5M1Q9H0R1 490 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 LCP1P13796 627 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 SLC47A2Q86VL8 602 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 STX18Q9P2W9 335 aaKnown RBP12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 AGAP1Q9UPQ3 857 aa12.77□□□□□ -0.36
NPC1L1-204ENST00000546276 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 HDAC4P56524 1084 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 PSMC6P62333 389 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 MCL1Q07820 350 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 PREPLQ4J6C6 727 aaPredicted RBP12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 ZCWPW2Q504Y3 356 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
NPC1L1-204ENST00000546276 TFDP3Q5H9I0 405 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms