RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 IPO5O00410 1097 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 POLRMTO00411 1230 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CLGNO14967 610 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 UNC5CO95185 931 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 PYGMP11217 842 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CYP11B1P15538 503 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CHRNB2P17787 502 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 GARTP22102 1010 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 RXRBP28702 533 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 MAPK4P31152 587 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 STX2P32856 288 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 QARSP47897 775 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 HSD17B4P51659 736 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CLNS1AP54105 237 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 YARSP54577 528 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 IRX1P78414 480 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 IFI35P80217 286 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 FMO1Q01740 532 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 TAP1Q03518 808 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 KRT17Q04695 432 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CBLBQ13191 982 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 MESDQ14696 234 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ZRSR2Q15696 482 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ARHGAP44Q17R89 818 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 WASHC2DQ5SRD0 308 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 C1orf53Q5VUE5 145 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 TTC27Q6P3X3 843 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ZNF365Q70YC5 407 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 MIER3Q7Z3K6 550 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ANKS1BQ7Z6G8 1248 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 PCGF5Q86SE9 256 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 FAM228AQ86W67 206 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 SIAH1Q8IUQ4 282 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 RHOT1Q8IXI2 618 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ALDH16A1Q8IZ83 802 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ZCCHC9Q8N567 271 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 CERS5Q8N5B7 392 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 GPATCH11Q8N954 259 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 FBXL13Q8NEE6 735 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 FLAD1Q8NFF5 587 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 EXD1Q8NHP7 514 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 MDM1Q8TC05 714 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 APBB2Q92870 758 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ZBTB9Q96C00 473 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 RBM41Q96IZ5 413 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 MFSD14AQ96MC6 490 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 NTPCRQ9BSD7 190 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 WDR18Q9BV38 432 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 KLF16Q9BXK1 252 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 DCLK3Q9C098 648 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 LRMDAQ9H2I8 198 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ECT2Q9H8V3 914 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 SAR1AQ9NR31 198 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 METTL5Q9NRN9 209 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 HSPBP1Q9NZL4 362 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 TMOD4Q9NZQ9 345 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 TMOD2Q9NZR1 351 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ASIC3Q9UHC3 531 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 BAIAP2L1Q9UHR4 511 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ANAPC5Q9UJX4 755 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 PRR12Q9ULL5 1215 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 DRG1Q9Y295 367 aaKnown RBP6.86□□□□□ -1.31
SNHG1-225ENST00000545920 EFR3BQ9Y2G0 817 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 TMX2Q9Y320 296 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 PCDHB2Q9Y5E7 798 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 USH1CQ9Y6N9 552 aa6.86□□□□□ -1.31
SNHG1-225ENST00000545920 ARFGEF1Q9Y6D6 1849 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 LOC102724159A0A0B4J2E5 919 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TCP11X1B4DZS4 312 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 MAFGO15525 162 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 PROSCO94903 275 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 UBOX5O94941 541 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 ZWINTO95229 277 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 IL1BP01584 269 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TRIM49P0CI25 452 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TRIM49CP0CI26 452 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 BRAFP15056 766 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 ATP2A2P16615 1042 aaKnown RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 IVDP26440 423 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 MSH2P43246 934 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 MAPK8P45983 427 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 AP3M2P53677 418 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 POLGP54098 1239 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 KRT76Q01546 638 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 PPP3CAQ08209 521 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SPARCL1Q14515 664 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 MORF4L2Q15014 288 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 PWP2Q15269 919 aaKnown RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 ZC2HC1CQ53FD0 456 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SH3PXD2AQ5TCZ1 1133 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 NUGGCQ68CJ6 796 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 VSTM1Q6UX27 236 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 HAUS6Q7Z4H7 955 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 NOP9Q86U38 636 aaKnown RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 ATCAYQ86WG3 371 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms