RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TIMP4Q99727 224 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 CPNE5Q9HCH3 593 aa6.16□□□□□ -1.42
SNHG1-224ENST00000545688 WDR27A2RRH5 827 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 F5H697 171 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 DTNBO60941 627 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 PROP1O75360 226 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 SNUPNO95149 360 aaKnown RBP6.15□□□□□ -1.42
SNHG1-224ENST00000545688 FTH1P19P0C7X4 201 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 LMO1P25800 156 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 NDUFV1P49821 464 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 PROK1P58294 105 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 NXPH1P58417 271 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 ITIH3Q06033 890 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-224ENST00000545688 KIF22Q14807 665 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 TAF2Q6P1X5 1199 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 HEATR3Q7Z4Q2 680 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 PRR18Q8N4B5 295 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 PSD4Q8NDX1 1056 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 CNPPD1Q9BV87 410 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 ABCF2Q9UG63 623 aa6.15□□□□□ -1.42
SNHG1-224ENST00000545688 SPATA31A3Q5VYP0 1347 aa6.15□□□□□ -1.43
SNHG1-224ENST00000545688 ADGRA2Q96PE1 1338 aa6.15□□□□□ -1.43
SNHG1-224ENST00000545688 VPS4BO75351 444 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 KIF20AO95235 890 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 ARIH2O95376 493 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 CHEK2O96017 543 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 RHOP08100 348 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 RARBP10826 455 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 CHRM3P20309 590 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 GPD1P21695 349 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 HK3P52790 923 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 BRDTQ58F21 947 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-224ENST00000545688 TMEM240Q5SV17 173 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 THEMIS2Q5TEJ8 643 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 USP45Q70EL2 814 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 TNPO1Q92973 898 aaKnown RBP6.14□□□□□ -1.43
SNHG1-224ENST00000545688 SARAFQ96BY9 339 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 TINAGL1Q9GZM7 467 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-224ENST00000545688 WDCPQ9H6R7 721 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 HOMER2Q9NSB8 354 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 KLC4Q9NSK0 619 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 FEZ2Q9UHY8 353 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-224ENST00000545688 ST3GAL5Q9UNP4 418 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 NR2E3Q9Y5X4 410 aa6.14□□□□□ -1.43
SNHG1-224ENST00000545688 SLC16A6O15403 523 aa6.13□□□□□ -1.43
SNHG1-224ENST00000545688 FTLP02792 175 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-224ENST00000545688 WT1P19544 449 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-224ENST00000545688 ZNF788Q6ZQV5 615 aa6.13□□□□□ -1.43
SNHG1-224ENST00000545688 CATIPQ7Z7H3 387 aa6.13□□□□□ -1.43
SNHG1-224ENST00000545688 OSBPL9Q96SU4 736 aa6.13□□□□□ -1.43
SNHG1-224ENST00000545688 TPSD1Q9BZJ3 242 aa6.13□□□□□ -1.43
SNHG1-224ENST00000545688 MRPL46Q9H2W6 279 aaKnown RBP6.13□□□□□ -1.43
SNHG1-224ENST00000545688 LUC7L2Q9Y383 392 aaKnown RBP6.13□□□□□ -1.43
SNHG1-224ENST00000545688 TRIAP1O43715 76 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 IL33O95760 270 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 POU2F2P09086 479 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 TOB1P50616 345 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-224ENST00000545688 MAP2K6P52564 334 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 TCF15Q12870 199 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 FOXF2Q12947 444 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 AMIGO2Q86SJ2 522 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 PPP1R3BQ86XI6 285 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 CPA6Q8N4T0 437 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 PBKQ96KB5 322 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 ACTRT3Q9BYD9 372 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 AMBRA1Q9C0C7 1298 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 LMBRD1Q9NUN5 540 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 ZDHHC8Q9ULC8 765 aa6.12□□□□□ -1.43
SNHG1-224ENST00000545688 M0QYG6 137 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 URI1O94763 535 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-224ENST00000545688 AHSGP02765 367 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 TYRP14679 529 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 ITPKBP27987 946 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 RBM20Q5T481 1227 aaKnown RBP6.11□□□□□ -1.43
SNHG1-224ENST00000545688 PPP1R32Q7Z5V6 425 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 USP37Q86T82 979 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 ZBTB46Q86UZ6 589 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 RASAL3Q86YV0 1011 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 SH2D3CQ8N5H7 860 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 ZCRB1Q8TBF4 217 aaKnown RBP6.11□□□□□ -1.43
SNHG1-224ENST00000545688 RFKQ969G6 155 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 HSPBAP1Q96EW2 488 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 HAPLN3Q96S86 360 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 GTPBP4Q9BZE4 634 aaKnown RBP6.11□□□□□ -1.43
SNHG1-224ENST00000545688 ADAM21Q9UKJ8 722 aa6.11□□□□□ -1.43
SNHG1-224ENST00000545688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.432e-26■□□□□ 8.9
SNHG1-224ENST00000545688 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 NR2F6P10588 404 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 ITGALP20701 1170 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 BOP1Q14137 746 aaKnown RBP6.1□□□□□ -1.43
SNHG1-224ENST00000545688 SRRM1Q8IYB3 904 aaKnown RBP6.1□□□□□ -1.43
SNHG1-224ENST00000545688 FKBP10Q96AY3 582 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 CHMP4CQ96CF2 233 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 ALG8Q9BVK2 526 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 SIK2Q9H0K1 926 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-224ENST00000545688 DKK3Q9UBP4 350 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 PCDHA1Q9Y5I3 950 aa6.1□□□□□ -1.43
SNHG1-224ENST00000545688 RAD54BQ9Y620 910 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms