RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 RFX1P22670 979 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
SNHG1-221ENST00000544983 IGFBP6P24592 240 aaPredicted RBP12.58□□□□□ -0.4
SNHG1-221ENST00000544983 GCNT1Q02742 428 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 MAPRE1Q15691 268 aaKnown RBP12.58□□□□□ -0.4
SNHG1-221ENST00000544983 CTXN3Q4LDR2 81 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 PLPP4Q5VZY2 271 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 WSCD1Q658N2 575 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 TPGS2Q68CL5 300 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 UNC93AQ86WB7 457 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 LMO3Q8TAP4 145 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 HDAC7Q8WUI4 952 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 SEMA4DQ92854 862 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 FAM161BQ96MY7 647 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 ACBD6Q9BR61 282 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 VPS16Q9H269 839 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 TAB2Q9NYJ8 693 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 L1RE1Q9UN81 338 aa12.58□□□□□ -0.4
SNHG1-221ENST00000544983 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 C2CD2LO14523 706 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 SERPINC1P01008 464 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 CNPP09543 421 aaKnown RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 SRGAP2BP0DMP2 458 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 IGFBP4P22692 258 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 CA8P35219 290 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 IRS1P35568 1242 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 GNL1P36915 607 aaPredicted RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 ASPAP45381 313 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 TSPY1Q01534 308 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 INCA1Q0VD86 236 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 CUL2Q13617 745 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 RAB33AQ14088 237 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 ADGRE1Q14246 886 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 TRIM65Q6PJ69 517 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 Q7L0L9 218 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 APTXQ7Z2E3 356 aaKnown RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 DCP1BQ8IZD4 617 aaKnown RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 TMEM130Q8N3G9 435 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 TNIP3Q96KP6 325 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 KLHL5Q96PQ7 755 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 CLSTN3Q9BQT9 956 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 PI4K2AQ9BTU6 479 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 INTS2Q9H0H0 1204 aaKnown RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 TLE6Q9H808 572 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 PLCB1Q9NQ66 1216 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
SNHG1-221ENST00000544983 BARX2Q9UMQ3 279 aaPredicted RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 COL4A4P53420 1690 aaPredicted RBP12.57□□□□□ -0.4
SNHG1-221ENST00000544983 A0A1B0GTH6 734 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 HIDE1A8MVS5 230 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 TEX28O15482 410 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 FOSL2P15408 326 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 KLRC2P26717 231 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 PON1P27169 355 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 OR1D2P34982 312 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 MFAP3P55082 362 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 UBXN1Q04323 297 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 GPR17Q13304 367 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 NFE2Q16621 373 aaPredicted RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 DUSP6Q16828 381 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 SCARA3Q6AZY7 606 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 EFHBQ8N7U6 833 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 ZNF461Q8TAF7 563 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 C2orf15Q8WU43 125 aaKnown RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 PLEKHA4Q9H4M7 779 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 APOBEC3GQ9HC16 384 aaKnown RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 APEX2Q9UBZ4 518 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 STXBP5LQ9Y2K9 1186 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 TIMM13Q9Y5L4 95 aaPredicted RBP12.56□□□□□ -0.4
SNHG1-221ENST00000544983 CDY1Q9Y6F8 540 aa12.56□□□□□ -0.4
SNHG1-221ENST00000544983 A0A1W2PQC6 194 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 A8MXQ7 604 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 CBFA2T2O43439 604 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 CLASP2O75122 1294 aaKnown RBP12.55□□□□□ -0.4
SNHG1-221ENST00000544983 GLUD1P00367 558 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 UBASH3AP57075 661 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 FANCCQ00597 558 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 UVSSAQ2YD98 709 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 TCEAL5Q5H9L2 206 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 SPOPLQ6IQ16 392 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 TMEM184AQ6ZMB5 413 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 CRYBG2Q8N1P7 616 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 OR6B3Q8NGW1 331 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 AUTS2Q8WXX7 1259 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 MYLIPQ8WY64 445 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 TATDN2Q93075 761 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 IQCDQ96DY2 449 aa12.55□□□□□ -0.4
SNHG1-221ENST00000544983 CRACR2AQ9BSW2 395 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms