RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 C7orf31Q8N865 590 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 OTUD5Q96G74 571 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 SMARCAD1Q9H4L7 1026 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 DNAJC18Q9H819 358 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 SLC24A3Q9HC58 644 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 METTL5Q9NRN9 209 aaKnown RBP6.09□□□□□ -1.43
VPS50-220ENST00000544910 SALL4Q9UJQ4 1053 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 SDC4P31431 198 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 PSMD6Q15008 389 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 KYNUQ16719 465 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 SIX6OS1Q8N1H7 587 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 EXD1Q8NHP7 514 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 MAML1Q92585 1016 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 TTC17Q96AE7 1141 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 MAGEB18Q96M61 343 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 OLFM3Q96PB7 478 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 TARS2Q9BW92 718 aaKnown RBP6.09□□□□□ -1.43
VPS50-220ENST00000544910 KDM4CQ9H3R0 1056 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 ELP3Q9H9T3 547 aa6.09□□□□□ -1.43
VPS50-220ENST00000544910 DDX20Q9UHI6 824 aaKnown RBP6.09□□□□□ -1.43
VPS50-220ENST00000544910 IGLV3-22A0A075B6J6 115 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 WNT10BO00744 389 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 GAS2O43903 313 aaKnown RBP6.09□□□□□ -1.44
VPS50-220ENST00000544910 LSM8O95777 96 aaKnown RBP6.09□□□□□ -1.44
VPS50-220ENST00000544910 SRGAP2BP0DMP2 458 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 PSMD7P51665 324 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 CDH6P55285 790 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 PDE1BQ01064 536 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 TMED1Q13445 227 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.09□□□□□ -1.44
VPS50-220ENST00000544910 SPOPLQ6IQ16 392 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 SV2AQ7L0J3 742 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 PPIL6Q8IXY8 311 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 FBXO25Q8TCJ0 367 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 SPDL1Q96EA4 605 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 LRRC37BQ96QE4 947 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 NGRNQ9NPE2 291 aaKnown RBP6.09□□□□□ -1.44
VPS50-220ENST00000544910 AVENQ9NQS1 362 aaPredicted RBP6.09□□□□□ -1.44
VPS50-220ENST00000544910 PPME1Q9Y570 386 aa6.09□□□□□ -1.44
VPS50-220ENST00000544910 MYH1P12882 1939 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 A0A0G2JND7 137 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GOLGA8QA0A0J9YX86 632 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GOLGA8OA6NCC3 632 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SRRM3A6NNA2 597 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 GOLGA8NF8WBI6 632 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SMAPO00193 183 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TOM1L1O75674 476 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 RRM1P23921 792 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 NLRP11P59045 1033 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 PTK6Q13882 451 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 RCN2Q14257 317 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 CCNG2Q16589 344 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 AADACL2Q6P093 401 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 C12orf56Q8IXR9 622 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 FAM71AQ8IYT1 594 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 CCNYQ8ND76 341 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 DNERQ8NFT8 737 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 EPS8L1Q8TE68 723 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 C9orf72Q96LT7 481 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ACAP3Q96P50 834 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ZNF518BQ9C0D4 1074 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 FGFR1OP2Q9NVK5 253 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GGA3Q9NZ52 723 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 PCYOX1Q9UHG3 505 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 HEY1Q9Y5J3 304 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ASAP2O43150 1006 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SLC25A27O95847 323 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 HNRNPH1P31943 449 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 ELF1P32519 619 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 CXCL9Q07325 125 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TMEM132DQ14C87 1099 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 STILQ15468 1287 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 PPP6R3Q5H9R7 873 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 RASSF3Q86WH2 238 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 ABRAQ8N0Z2 381 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 LRRC57Q8N9N7 239 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 PARD3BQ8TEW8 1205 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 NSMCE1Q8WV22 266 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 KIF12Q96FN5 646 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 HAUS8Q9BT25 410 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 DCAF8L1A6NGE4 600 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 KRT38O76015 456 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 WEE2P0C1S8 567 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 RARAP10276 462 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TXNP10599 105 aaKnown RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 ZFXP17010 805 aaPredicted RBP6.08□□□□□ -1.44
VPS50-220ENST00000544910 COPS2P61201 443 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TGFB2P61812 414 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 WDR72Q3MJ13 1102 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 PRAMEF18Q5VWM3 479 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SPOCD1Q6ZMY3 1216 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 CATSPER4Q7RTX7 472 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 LRRC71Q8N4P6 559 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 MTMR12Q9C0I1 747 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 STOML1Q9UBI4 398 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 SATB2Q9UPW6 733 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 TTLL3Q9Y4R7 772 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 BTAF1O14981 1849 aa6.08□□□□□ -1.44
VPS50-220ENST00000544910 GPD1P21695 349 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms