RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	TMEM74B	Q9NUR3	256 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	SRRD	Q9UH36	339 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	NEU2	Q9Y3R4	380 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	USP19	O94966	1318 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506		A0A1W2PS29	197 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	MYO1F	O00160	1098 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	GOLIM4	O00461	696 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	TOR1B	O14657	336 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	FRS3	O43559	492 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	PRC1	O43663	620 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	FOS	P01100	380 aa	Predicted RBP	6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	CHRM3	P20309	590 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	MAK	P20794	623 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	PEX2	P28328	305 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	VAV2	P52735	878 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	ARFIP2	P53365	341 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	LY6G5C	Q5SRR4	150 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	TMPRSS9	Q7Z410	1059 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	CLNK	Q7Z7G1	428 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	PSD4	Q8NDX1	1056 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	KBTBD7	Q8WVZ9	684 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	ASB10	Q8WXI3	467 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	TMEM125	Q96AQ2	219 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	UNKL	Q9H9P5	680 aa	Known RBP	6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	PLEKHM1	Q9Y4G2	1056 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	PCDHGB6	Q9Y5F9	930 aa		6.56	□□□□□ -1.36
LEMD3-205	ENST00000544506	PRAMEF33	A0A0G2JMD5	474 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	TBX3	O15119	743 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	PRAMEF10	O60809	474 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	GRP	P07492	148 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	EN2	P19622	333 aa	Predicted RBP	6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	FDXR	P22570	491 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	TOB1	P50616	345 aa	Predicted RBP	6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	ANXA11	P50995	505 aa	Known RBP	6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	SCAP	Q12770	1279 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	SEMA5A	Q13591	1074 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	POLD3	Q15054	466 aa	Predicted RBP	6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	FAM160B1	Q5W0V3	765 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	TAF2	Q6P1X5	1199 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	POC1B	Q8TC44	478 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	DPH1	Q9BZG8	443 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	HESX1	Q9UBX0	185 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	TPCN1	Q9ULQ1	816 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	FAM50B	Q9Y247	325 aa		6.55	□□□□□ -1.36
LEMD3-205	ENST00000544506	MYADML2	A6NDP7	307 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506		E7ENX8	843 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	MGEA5	O60502	916 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	ADH4	P08319	380 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	MYF5	P13349	255 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	MCM7	P33993	719 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	TAP2	Q03519	686 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	ABHD18	Q0P651	414 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	BOP1	Q14137	746 aa	Known RBP	6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	CD300E	Q496F6	205 aa	Predicted RBP	6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	PREPL	Q4J6C6	727 aa	Predicted RBP	6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	ZNF783	Q6ZMS7	281 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	GPR149	Q86SP6	731 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	COLGALT2	Q8IYK4	626 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	ADGRG5	Q8IZF4	528 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	OR6B3	Q8NGW1	331 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	FUBP1	Q96AE4	644 aa	Known RBP	6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	SARG	Q9BW04	601 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	WDR11	Q9BZH6	1224 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	LRRC27	Q9C0I9	530 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	SMOC2	Q9H3U7	446 aa		6.54	□□□□□ -1.36
LEMD3-205	ENST00000544506	TRGV11	A0A075B6L2	103 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	BTN3A1	O00481	513 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	CAND2	O75155	1236 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	ITGAM	P11215	1152 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	BRAF	P15056	766 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	SLC11A2	P49281	568 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	SUMO3	P55854	103 aa	Predicted RBP	6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	UCP3	P55916	312 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	RPS7	P62081	194 aa	Known RBP	6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	ZXDA	P98168	799 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	FPGS	Q05932	587 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	DYRK1A	Q13627	763 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	PTPA	Q15257	358 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	CCAR1	Q8IX12	1150 aa	Known RBP	6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	FBXO41	Q8TF61	875 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	MAML1	Q92585	1016 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	APIP	Q96GX9	242 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	SPATA5L1	Q9BVQ7	753 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	APOL5	Q9BWW9	433 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	SERHL2	Q9H4I8	314 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	STK32B	Q9NY57	414 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	CPNE7	Q9UBL6	633 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	HS3ST3A1	Q9Y663	406 aa		6.53	□□□□□ -1.36
LEMD3-205	ENST00000544506	ISM1	B1AKI9	464 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	FZD7	O75084	574 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	TH	P07101	528 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	TRIM27	P14373	513 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	PURA	Q00577	322 aa	Known RBP	6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	SLC13A2	Q13183	592 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	CTBP1	Q13363	440 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	COBLL1	Q53SF7	1204 aa		6.52	□□□□□ -1.37

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