RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 LLGL1Q15334 1064 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 CRB2Q5IJ48 1285 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 RNF220Q5VTB9 566 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 FAM160B1Q5W0V3 765 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 PPP4R4Q6NUP7 873 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 SWSAP1Q6NVH7 229 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 TAPT1Q6NXT6 567 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 CCDC149Q6ZUS6 474 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 ULK2Q8IYT8 1036 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 AMER2Q8N7J2 671 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 FAM156AQ8NDB6 213 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 LRTOMTQ8WZ04 291 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 NACC2Q96BF6 587 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 RNF31Q96EP0 1072 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 NT5C1BQ96P26 610 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 MOGAT1Q96PD6 335 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 SARGQ9BW04 601 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 TRIM54Q9BYV2 358 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 C22orf23Q9BZE7 217 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 DPH1Q9BZG8 443 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 LRRC27Q9C0I9 530 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 TBCCD1Q9NVR7 557 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 ETAA1Q9NY74 926 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.94□□□□□ -1.94
YBX3-214ENST00000544501 CPA4Q9UI42 421 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 MAP3K2Q9Y2U5 619 aa2.94□□□□□ -1.94
YBX3-214ENST00000544501 CYR61O00622 381 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 MGEA5O60502 916 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 LPXNO60711 386 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 DNAJB5O75953 348 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 KIF20AO95235 890 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 SPDEFO95238 335 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 EGR2P11161 476 aaPredicted RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 CYP2C9P11712 490 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 XRCC6P12956 609 aaKnown RBP eCLIP2.93□□□□□ -1.94
YBX3-214ENST00000544501 MYF5P13349 255 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 PHKG2P15735 406 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 TGM1P22735 817 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 ACVRL1P37023 503 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 GNALP38405 381 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 VIPR2P41587 438 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 GDF5P43026 501 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 PURAQ00577 322 aaKnown RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 FPGSQ05932 587 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 SEMA5AQ13591 1074 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 GALEQ14376 348 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 KIAA0753Q2KHM9 967 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 CCSAPQ6IQ19 270 aaPredicted RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 APOA5Q6Q788 366 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 ZNF783Q6ZMS7 281 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 MICALCLQ6ZW33 695 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 C11orf96Q7Z7L8 435 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 KRT78Q8N1N4 520 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 Q8N1X5 172 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 LNX2Q8N448 690 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 OR6B3Q8NGW1 331 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 TIFAQ96CG3 184 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 APIPQ96GX9 242 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 LRIG1Q96JA1 1093 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 COQ10AQ96MF6 247 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 OSBPL9Q96SU4 736 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 NELL2Q99435 816 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 HEPHQ9BQS7 1158 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 MLST8Q9BVC4 326 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 SPATA5L1Q9BVQ7 753 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 NUP62CLQ9H1M0 184 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 BHMT2Q9H2M3 363 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 SERHL2Q9H4I8 314 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 UNKLQ9H9P5 680 aaKnown RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 INTS13Q9NVM9 706 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 VSX1Q9NZR4 365 aaPredicted RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 RGS17Q9UGC6 210 aaPredicted RBP2.93□□□□□ -1.94
YBX3-214ENST00000544501 STAP2Q9UGK3 403 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 AGAP1Q9UPQ3 857 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 RAD54BQ9Y620 910 aa2.93□□□□□ -1.94
YBX3-214ENST00000544501 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.93□□□□□ -1.94
YBX3-214ENST00000544501 COL4A3Q01955 1670 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TRGV11A0A075B6L2 103 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TMEM191CA6NGB0 347 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 UNC119BA6NIH7 251 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 M0QYG6 137 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 MYO1CO00159 1063 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 FOXN3O00409 490 aaPredicted RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 BTN3A1O00481 513 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TOR1BO14657 336 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TBX3O15119 743 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 PRC1O43663 620 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TRIAP1O43715 76 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TBC1D4O60343 1298 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 ZFPL1O95159 310 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 UNC5CO95185 931 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 KRT18P05783 430 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 GRPP07492 148 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 ATXN1LP0C7T5 689 aaKnown RBP2.92□□□□□ -1.94
YBX3-214ENST00000544501 HKR1P10072 659 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 SRGNP10124 158 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 KITP10721 976 aa2.92□□□□□ -1.94
YBX3-214ENST00000544501 TRIM27P14373 513 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms