RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 GPR17Q13304 367 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 UVSSAQ2YD98 709 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 GPR149Q86SP6 731 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 KBTBD7Q8WVZ9 684 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 SYAP1Q96A49 352 aaPredicted RBP20.54■□□□□ 0.88
DDX55-211ENST00000544429 ZNF707Q96C28 371 aaPredicted RBP20.54■□□□□ 0.88
DDX55-211ENST00000544429 TMEM8AQ9HCN3 771 aa20.54■□□□□ 0.88
DDX55-211ENST00000544429 HUS1O60921 280 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 RFPL2O75678 378 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 ASS1P00966 412 aaKnown RBP20.53■□□□□ 0.88
DDX55-211ENST00000544429 POU2F2P09086 479 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 GCLMP48507 274 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 STX17P56962 302 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 BIRC3Q13489 604 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 ELMSAN1Q6PJG2 1045 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 CYP26C1Q6V0L0 522 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 METTL23Q86XA0 190 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 TCEAL8Q8IYN2 117 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 SLC35C1Q96A29 364 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 TMEM209Q96SK2 561 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 ZCWPW1Q9H0M4 648 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 METTL14Q9HCE5 456 aaKnown RBP20.53■□□□□ 0.88
DDX55-211ENST00000544429 TMEM63CQ9P1W3 806 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 ARMCX3Q9UH62 379 aaPredicted RBP20.53■□□□□ 0.88
DDX55-211ENST00000544429 AFF4Q9UHB7 1163 aaKnown RBP20.53■□□□□ 0.88
DDX55-211ENST00000544429 CDH22Q9UJ99 828 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 NOTCH4Q99466 2003 aa20.53■□□□□ 0.88
DDX55-211ENST00000544429 TTC28Q96AY4 2481 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 TACC1O75410 805 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 TRPC3Q13507 836 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 CT47A1Q5JQC4 288 aaPredicted RBP20.52■□□□□ 0.88
DDX55-211ENST00000544429 RARS2Q5T160 578 aaKnown RBP20.52■□□□□ 0.88
DDX55-211ENST00000544429 CCDC183Q5T5S1 534 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 TMC5Q6UXY8 1006 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 RNF19BQ6ZMZ0 732 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 OSTM1Q86WC4 334 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 TAS1R2Q8TE23 839 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 TAF4BQ92750 862 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 PKMYT1Q99640 499 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 FAM50BQ9Y247 325 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 COQ4Q9Y3A0 265 aa20.52■□□□□ 0.88
DDX55-211ENST00000544429 R3HCC1Q9Y3T6 440 aaKnown RBP20.52■□□□□ 0.88
DDX55-211ENST00000544429 CCDC195A0A1B0GUA6 201 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 PMM2O15305 246 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 PHACTR2O75167 634 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 SEC24AO95486 1093 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 HLA-DRAP01903 254 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 C8AP07357 584 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 HNRNPA1P09651 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
DDX55-211ENST00000544429 OR4Q2P0C623 313 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 WARSP23381 471 aaKnown RBP20.51■□□□□ 0.87
DDX55-211ENST00000544429 ERCC5P28715 1186 aaPredicted RBP20.51■□□□□ 0.87
DDX55-211ENST00000544429 LHX1P48742 406 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 CBX2Q14781 532 aaPredicted RBP20.51■□□□□ 0.87
DDX55-211ENST00000544429 SGSM1Q2NKQ1 1148 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 WDR72Q3MJ13 1102 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 KRT39Q6A163 491 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 LRRTM3Q86VH5 581 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 TRIM59Q8IWR1 403 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 ADGRF2Q8IZF7 708 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 THEM5Q8N1Q8 247 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 ACBD6Q9BR61 282 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 APOL5Q9BWW9 433 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 SRRTQ9BXP5 876 aaKnown RBP20.51■□□□□ 0.87
DDX55-211ENST00000544429 PRKD2Q9BZL6 878 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 PRKAG3Q9UGI9 489 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 NME7Q9Y5B8 376 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 PTPRDP23468 1912 aa20.51■□□□□ 0.87
DDX55-211ENST00000544429 STX10O60499 249 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 GNA14O95837 355 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 CPB1P15086 417 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 ZNF699Q32M78 642 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 CBWD6Q4V339 395 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 CBWD3Q5JTY5 395 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 CBWD5Q5RIA9 395 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 CES5AQ6NT32 575 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 IRF2BP1Q8IU81 584 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 SLC7A14Q8TBB6 771 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 NECTIN4Q96NY8 510 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 CRISPLD1Q9H336 500 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 DDX43Q9NXZ2 648 aaKnown RBP20.5■□□□□ 0.87
DDX55-211ENST00000544429 HSFX1Q9UBD0 423 aa20.5■□□□□ 0.87
DDX55-211ENST00000544429 DOCK8Q8NF50 2099 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 MTMR11A4FU01 709 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 MTHFRP42898 656 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 MXI1P50539 228 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 ARPP19P56211 112 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 SMARCB1Q12824 385 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 LIN9Q5TKA1 542 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 CCDC149Q6ZUS6 474 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 SEMA4DQ92854 862 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 RIPOR3Q96MK2 946 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 APOBEC3GQ9HC16 384 aaKnown RBP20.49■□□□□ 0.87
DDX55-211ENST00000544429 DACH1Q9UI36 760 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 POLIQ9UNA4 740 aa20.49■□□□□ 0.87
DDX55-211ENST00000544429 C19orf67A6NJJ6 358 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 HCRTO43612 131 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 LRRN2O75325 713 aa20.48■□□□□ 0.87
DDX55-211ENST00000544429 WEE2P0C1S8 567 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms