RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CYP3A5P20815 502 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 MMP8P22894 467 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 C2orf54Q08AI8 447 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 MMS22LQ6ZRQ5 1243 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 MMGT1Q8N4V1 131 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 WDTC1Q8N5D0 677 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 FAM105AQ9NUU6 356 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 PTCH2Q9Y6C5 1203 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 HTTP42858 3142 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 C2CD6Q53TS8 623 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 BTBD6Q96KE9 485 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 SELENOOQ9BVL4 669 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 PARD6BQ9BYG5 372 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 LHX5Q9H2C1 402 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 NOD1Q9Y239 953 aa21.09■□□□□ 0.97
COPS7A-218ENST00000543939 TMEM110-MUSTN1A8MSY1 372 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 COMTP21964 271 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 SOX4Q06945 474 aaPredicted RBP21.08■□□□□ 0.97
COPS7A-218ENST00000543939 ORC1Q13415 861 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 PLEKHA7Q6IQ23 1121 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 DENND1BQ6P3S1 775 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 SLC43A3Q8NBI5 491 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 C1orf131Q8NDD1 294 aaKnown RBP21.08■□□□□ 0.97
COPS7A-218ENST00000543939 ACTRT1Q8TDG2 376 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 PADI3Q9ULW8 664 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 SNX9Q9Y5X1 595 aa21.08■□□□□ 0.97
COPS7A-218ENST00000543939 MIF4GDA9UHW6 222 aaKnown RBP21.07■□□□□ 0.96
COPS7A-218ENST00000543939 PTGESO14684 152 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 RHOXF2BP0C7M4 288 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 ATF7P17544 494 aaPredicted RBP21.07■□□□□ 0.96
COPS7A-218ENST00000543939 CD52P31358 61 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 NDST1P52848 882 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 LPIN1Q14693 890 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 LLGL2Q6P1M3 1020 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 RASGEF1CQ8N431 466 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 CD101Q93033 1021 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 RHOXF2Q9BQY4 288 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 ANAPC7Q9UJX3 599 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 A0A1W2PQ45 241 aaPredicted RBP21.07■□□□□ 0.96
COPS7A-218ENST00000543939 A0A1W2PQY0 241 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 CEP104O60308 925 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 CAND2O75155 1236 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 GHRP10912 638 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 VDRP11473 427 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 ITGA4P13612 1032 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 MAMLD1Q13495 774 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 PHLDB2Q86SQ0 1253 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 HACE1Q8IYU2 909 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 PDCL2Q8N4E4 241 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 PPP1R10Q96QC0 940 aaKnown RBP21.07■□□□□ 0.96
COPS7A-218ENST00000543939 TRIM17Q9Y577 477 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 CEP83Q9Y592 693 aa21.07■□□□□ 0.96
COPS7A-218ENST00000543939 CALB1P05937 261 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 PAK2Q13177 524 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 DSC3Q14574 896 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 DCAF12L1Q5VU92 463 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 MRPL10Q7Z7H8 261 aaKnown RBP21.06■□□□□ 0.96
COPS7A-218ENST00000543939 USP38Q8NB14 1042 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 ZFP42Q96MM3 310 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 ZNF560Q96MR9 790 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 PNKPQ96T60 521 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 MRPL45Q9BRJ2 306 aaKnown RBP21.06■□□□□ 0.96
COPS7A-218ENST00000543939 TRAIPQ9BWF2 469 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 NT5C1AQ9BXI3 368 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 WNT8AQ9H1J5 351 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 CARD9Q9H257 536 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 MRPL47Q9HD33 250 aaKnown RBP21.06■□□□□ 0.96
COPS7A-218ENST00000543939 RAB21Q9UL25 225 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 KIAA1257Q9ULG3 409 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 SQORQ9Y6N5 450 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 SCINQ9Y6U3 715 aa21.06■□□□□ 0.96
COPS7A-218ENST00000543939 MEIS3P2A8K0S8 358 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 LRPAP1P30533 357 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 PNPLA4P41247 253 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 CNGA2Q16280 664 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 ZNF618Q5T7W0 954 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 CPNE8Q86YQ8 564 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 ALG3Q92685 438 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 HEXIM2Q96MH2 286 aaKnown RBP21.05■□□□□ 0.96
COPS7A-218ENST00000543939 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.05■□□□□ 0.96
COPS7A-218ENST00000543939 TRIM7Q9C029 511 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.05■□□□□ 0.96
COPS7A-218ENST00000543939 GOLGA2P5Q9HBQ8 144 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 RBM12Q9NTZ6 932 aaKnown RBP21.05■□□□□ 0.96
COPS7A-218ENST00000543939 GDAP2Q9NXN4 497 aa21.05■□□□□ 0.96
COPS7A-218ENST00000543939 TTC7AQ9ULT0 858 aaPredicted RBP21.05■□□□□ 0.96
COPS7A-218ENST00000543939 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.05■□□□□ 0.96
COPS7A-218ENST00000543939 TCRBV5S1A1TA0A578 114 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 O00370 1275 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 MGEA5O60502 916 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 ZNF623O75123 536 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 CTNNA2P26232 953 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 CLCN6P51797 869 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 RNASE9P60153 205 aaKnown RBP21.04■□□□□ 0.96
COPS7A-218ENST00000543939 ERICH1Q86X53 443 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 GSTCDQ8NEC7 633 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 KRT35Q92764 455 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 TRPV6Q9H1D0 765 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 STARD7Q9NQZ5 370 aa21.04■□□□□ 0.96
COPS7A-218ENST00000543939 PARVAQ9NVD7 372 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms