RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 ANKLE1Q8NAG6 615 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 INPP5DQ92835 1189 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 DGCR14Q96DF8 476 aaKnown RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 SEPT11Q9NVA2 429 aaKnown RBP11.89□□□□□ -0.51
CDH4-201ENST00000543233 NOX1Q9Y5S8 564 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
CDH4-201ENST00000543233 TMEM150BA6NC51 233 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 MGEA5O60502 916 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 GH1P01241 217 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 XRCC5P13010 732 aaKnown RBP11.88□□□□□ -0.51
CDH4-201ENST00000543233 KLRC1P26715 233 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 HOXD13P35453 343 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 TCF7P36402 384 aaPredicted RBP11.88□□□□□ -0.51
CDH4-201ENST00000543233 GRIA2P42262 883 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 LPIN1Q14693 890 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 SLC15A2Q16348 729 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 HGSNATQ68CP4 663 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 INPP4AQ96PE3 977 aaPredicted RBP11.88□□□□□ -0.51
CDH4-201ENST00000543233 NRDE2Q9H7Z3 1164 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 FOXO6A8MYZ6 492 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 MAPK13O15264 365 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
CDH4-201ENST00000543233 APOEP02649 317 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 CREB1P16220 341 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 FGFR4P22455 802 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 PHBP35232 272 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 PCYT1AP49585 367 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 SP4Q02446 784 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 ASIC2Q16515 512 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 DAB2IPQ5VWQ8 1189 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 GMCL1P1Q8NEA9 526 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
CDH4-201ENST00000543233 ZNF577Q9BSK1 485 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 ANGPTL2Q9UKU9 493 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 TRAF3IP3Q9Y228 551 aa11.88□□□□□ -0.51
CDH4-201ENST00000543233 CFAP69A5D8W1 941 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 RASA4BC9J798 803 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 RASA4O43374 803 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 SLC26A4O43511 780 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 HAUS5O94927 633 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 NR3C1P04150 777 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 ALAS1P13196 640 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 ITGA4P13612 1032 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 KPNA1P52294 538 aaPredicted RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 EMP3P54852 163 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 MED21Q13503 144 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 EXOC3L4Q17RC7 722 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 RNF43Q68DV7 783 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 RINT1Q6NUQ1 792 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 RSBN1LQ6PCB5 846 aaPredicted RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 PHLDB2Q86SQ0 1253 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 PGM2Q96G03 612 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 CCDC28BQ9BUN5 200 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 PCIF1Q9H4Z3 704 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 TRNAU1APQ9NX07 287 aaKnown RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 CEP72Q9P209 647 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 WRAP73Q9P2S5 460 aaPredicted RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 VAV3Q9UKW4 847 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 TISP43B9A030 160 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 ADAM23O75077 832 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 ENTPD3O75355 529 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 DPEP1P16444 411 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 RASSF3Q86WH2 238 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 TTLL6Q8N841 843 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 C7orf43Q8WVR3 580 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 NSMCE3Q96MG7 304 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 ECSITQ9BQ95 431 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 GRIP2Q9C0E4 1043 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 CCDC68Q9H2F9 335 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 CCDC134Q9H6E4 229 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 CTDP1Q9Y5B0 961 aaPredicted RBP11.87□□□□□ -0.51
CDH4-201ENST00000543233 UMODL1Q5DID0 1318 aa11.87□□□□□ -0.51
CDH4-201ENST00000543233 CYP3A7-CYP3A51PA0A087WV96 503 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 KANSL1LA0AUZ9 987 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CBFA2T3O75081 653 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 USP1O94782 785 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 SLITRK3O94933 977 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 EGFRP00533 1210 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 CYP3A7P24462 503 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 PTK2Q05397 1052 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 COBLL1Q53SF7 1204 aa11.86□□□□□ -0.51
CDH4-201ENST00000543233 ODR4Q5SWX8 454 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms