RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
DDX11-223ENST00000542838 ZFATQ9P243 1243 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 WDR91A4D1P6 747 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 GOLGA8SH3BPF8 625 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 GOLGA8MH3BSY2 632 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 CLGNO14967 610 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 BANF1O75531 89 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 KRT4P19013 534 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 IRX1P78414 480 aaPredicted RBP13.64□□□□□ -0.23
DDX11-223ENST00000542838 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
DDX11-223ENST00000542838 SLC45A4Q5BKX6 768 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
DDX11-223ENST00000542838 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 CYLDQ9NQC7 956 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 IP6K2Q9UHH9 426 aa13.64□□□□□ -0.23
DDX11-223ENST00000542838 A6NHS1 94 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 C2CD2LO14523 706 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 ENTPD5O75356 428 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 IFNB1P01574 187 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 ACO1P21399 889 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 SFNP31947 248 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 RPL7AP62424 266 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 PLCB3Q01970 1234 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 RNASEH2BQ5TBB1 312 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 TDRD10Q5VZ19 366 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 DRICH1Q6PGQ1 229 aaPredicted RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 NLRX1Q86UT6 975 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 PHF13Q86YI8 300 aaPredicted RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 ENDOVQ8N8Q3 282 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 DENND2DQ9H6A0 471 aaPredicted RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 PARVAQ9NVD7 372 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 TRAFD1O14545 582 aaPredicted RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 CUL2Q13617 745 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 PGM5Q15124 567 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 MAPK6Q16659 721 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 CCDC142Q17RM4 750 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 ZACNQ401N2 412 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 LMNTD2Q8IXW0 634 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 SUPT20HQ8NEM7 779 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 DCTN4Q9UJW0 460 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 DRG1Q9Y295 367 aaKnown RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 IVNS1ABPQ9Y6Y0 642 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 RGPD3A6NKT7 1758 aaPredicted RBP13.63□□□□□ -0.23
DDX11-223ENST00000542838 RGPD4Q7Z3J3 1758 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 NFASCO94856 1347 aa13.63□□□□□ -0.23
DDX11-223ENST00000542838 TESPA1A2RU30 521 aaPredicted RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 SGK1O00141 431 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 ZWINTO95229 277 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 C4BPAP04003 597 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 LINGO3P0C6S8 592 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 TROVE2P10155 538 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX11-223ENST00000542838 PTDSS1P48651 473 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 WNT7BP56706 349 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 GEMIN4P57678 1058 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 KRT76Q01546 638 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 ANO7Q6IWH7 933 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 SPOCD1Q6ZMY3 1216 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 ASAP3Q8TDY4 903 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 FBXO41Q8TF61 875 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 FAM151AQ8WW52 585 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 TMEM121Q9BTD3 319 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 YIPF3Q9GZM5 350 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 C17orf75Q9HAS0 396 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 RAVER2Q9HCJ3 691 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 EXTL3O43909 919 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 ADRA1DP25100 572 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 MARK3P27448 753 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 VCPP55072 806 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 GPX6P59796 221 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 OVGP1Q12889 678 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 EFTUD2Q15029 972 aaKnown RBP eCLIP13.62□□□□□ -0.233e-6■■■■□ 24.2
DDX11-223ENST00000542838 EFHC2Q5JST6 749 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 SPDYAQ5MJ70 313 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX11-223ENST00000542838 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 APOBEC3GQ9HC16 384 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX11-223ENST00000542838 SHOC2Q9UQ13 582 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
DDX11-223ENST00000542838 VNN1O95497 513 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 PDHA1P08559 390 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 ACOT2P49753 483 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 LIG4P49917 911 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 ENPEPQ07075 957 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 PSMD6Q15008 389 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 WDR72Q3MJ13 1102 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 CLNKQ7Z7G1 428 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
DDX11-223ENST00000542838 ANKFY1Q9P2R3 1169 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms