RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PIH1D1Q9NWS0 290 aaKnown RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 HSFX1Q9UBD0 423 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 NEU2Q9Y3R4 380 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 HS3ST4Q9Y661 456 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 COMMD10Q9Y6G5 202 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 A0A087X1B8 175 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CENPVL1A0A0U1RR11 272 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CCDC195A0A1B0GUA6 201 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CFAP69A5D8W1 941 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 UNC119BA6NIH7 251 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 MARCH11A6NNE9 402 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 POLRMTO00411 1230 aaKnown RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 TOR1BO14657 336 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 PHGDHO43175 533 aaKnown RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 KCNA2P16389 499 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CACNB3P54284 484 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 USP14P54578 494 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 GBX1Q14549 363 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 GRM3Q14832 879 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 PREPLQ4J6C6 727 aaPredicted RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 EMC10Q5UCC4 262 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 B3GNTL1Q67FW5 361 aaPredicted RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 LAIR1Q6GTX8 287 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 TAPT1Q6NXT6 567 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CCDC149Q6ZUS6 474 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 MAEAQ7L5Y9 396 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 SRGAP1Q7Z6B7 1085 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CLNKQ7Z7G1 428 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 LDLRAD3Q86YD5 345 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 KIAA0319LQ8IZA0 1049 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 LCORLQ8N3X6 602 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 SAMD3Q8N6K7 520 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 FBXO41Q8TF61 875 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 CHFRQ96EP1 664 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 BOD1Q96IK1 185 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 TRIB1Q96RU8 372 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 TINAGL1Q9GZM7 467 aaPredicted RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 GPR35Q9HC97 309 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 ANKFY1Q9P2R3 1169 aa4.01□□□□□ -1.77
USP28-210ENST00000542033 TESQ9UGI8 421 aaKnown RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 DDX20Q9UHI6 824 aaKnown RBP4.01□□□□□ -1.77
USP28-210ENST00000542033 CCDC78A2IDD5 438 aa4□□□□□ -1.77
USP28-210ENST00000542033 PRSS29PA6NIE9 313 aa4□□□□□ -1.77
USP28-210ENST00000542033 E9PLN8 166 aa4□□□□□ -1.77
USP28-210ENST00000542033 M0QYG6 137 aa4□□□□□ -1.77
USP28-210ENST00000542033 LPXNO60711 386 aa4□□□□□ -1.77
USP28-210ENST00000542033 VPS4BO75351 444 aa4□□□□□ -1.77
USP28-210ENST00000542033 HDCP19113 662 aa4□□□□□ -1.77
USP28-210ENST00000542033 ZFP36P26651 326 aaKnown RBP4□□□□□ -1.77
USP28-210ENST00000542033 POU6F2P78424 691 aaPredicted RBP4□□□□□ -1.77
USP28-210ENST00000542033 FPGSQ05932 587 aa4□□□□□ -1.77
USP28-210ENST00000542033 BRD3Q15059 726 aa4□□□□□ -1.77
USP28-210ENST00000542033 CNN3Q15417 329 aaKnown RBP4□□□□□ -1.77
USP28-210ENST00000542033 CYP2A13Q16696 494 aa4□□□□□ -1.77
USP28-210ENST00000542033 AMOTQ4VCS5 1084 aa4□□□□□ -1.77
USP28-210ENST00000542033 CRB2Q5IJ48 1285 aa4□□□□□ -1.77
USP28-210ENST00000542033 ABHD17BQ5VST6 288 aa4□□□□□ -1.77
USP28-210ENST00000542033 DARS2Q6PI48 645 aaKnown RBP4□□□□□ -1.77
USP28-210ENST00000542033 SLC30A10Q6XR72 485 aa4□□□□□ -1.77
USP28-210ENST00000542033 ZNF627Q7L945 461 aa4□□□□□ -1.77
USP28-210ENST00000542033 USP37Q86T82 979 aa4□□□□□ -1.77
USP28-210ENST00000542033 DGKHQ86XP1 1220 aa4□□□□□ -1.77
USP28-210ENST00000542033 CELF5Q8N6W0 485 aaKnown RBP4□□□□□ -1.77
USP28-210ENST00000542033 NSUN7Q8NE18 718 aaKnown RBP4□□□□□ -1.77
USP28-210ENST00000542033 SUPT20HQ8NEM7 779 aa4□□□□□ -1.77
USP28-210ENST00000542033 TMEM125Q96AQ2 219 aa4□□□□□ -1.77
USP28-210ENST00000542033 NT5C1BQ96P26 610 aa4□□□□□ -1.77
USP28-210ENST00000542033 VKORC1Q9BQB6 163 aa4□□□□□ -1.77
USP28-210ENST00000542033 TTPALQ9BTX7 342 aa4□□□□□ -1.77
USP28-210ENST00000542033 SERHL2Q9H4I8 314 aa4□□□□□ -1.77
USP28-210ENST00000542033 SLITRK6Q9H5Y7 841 aa4□□□□□ -1.77
USP28-210ENST00000542033 ZMAT3Q9HA38 289 aaKnown RBP4□□□□□ -1.77
USP28-210ENST00000542033 TBCCD1Q9NVR7 557 aa4□□□□□ -1.77
USP28-210ENST00000542033 L1RE1Q9UN81 338 aa4□□□□□ -1.77
USP28-210ENST00000542033 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4□□□□□ -1.77
USP28-210ENST00000542033 TRGV11A0A075B6L2 103 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 PRAMEF33A0A0G2JMD5 474 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 MYADML2A6NDP7 307 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 MYO1CO00159 1063 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 TPP1O14773 563 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 FOXN1O15353 648 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 MGEA5O60502 916 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 PRAMEF10O60809 474 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 KIF20AO95235 890 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 SPDEFO95238 335 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 ZBED1O96006 694 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 KITP10721 976 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 ITGAMP11215 1152 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 SLC7A1P30825 629 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 ANXA11P50995 505 aaKnown RBP3.99□□□□□ -1.77
USP28-210ENST00000542033 VAV2P52735 878 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 RPS7P62081 194 aaKnown RBP3.99□□□□□ -1.77
USP28-210ENST00000542033 FAM193AP78312 1265 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 TP53BP2Q13625 1128 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 GEN1Q17RS7 908 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 KIAA0753Q2KHM9 967 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 LONRF3Q496Y0 759 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 RNF220Q5VTB9 566 aa3.99□□□□□ -1.77
USP28-210ENST00000542033 FAM160B1Q5W0V3 765 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms