RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 DDX23Q9BUQ8 820 aaKnown RBP18.23■□□□□ 0.51
SPIDR-227ENST00000541342 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 ACVR2BQ13705 512 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 TAX1BP1Q86VP1 789 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 B4GALT5O43286 388 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 IFNAR2P48551 515 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 ZNF484Q5JVG2 852 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 EXOC3L1Q86VI1 746 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 LINC01465Q8N7H1 131 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 MAGEC3Q8TD91 643 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 ELAC2Q9BQ52 826 aaKnown RBP18.23■□□□□ 0.51
SPIDR-227ENST00000541342 C2orf40Q9H1Z8 148 aa18.23■□□□□ 0.51
SPIDR-227ENST00000541342 ZNF157P51786 506 aaPredicted RBP18.22■□□□□ 0.51
SPIDR-227ENST00000541342 DUSP28Q4G0W2 176 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 SPOPLQ6IQ16 392 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 MFSD5Q6N075 450 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 CGRRF1Q99675 332 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 FZD8Q9H461 694 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 ABCF3Q9NUQ8 709 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 ANK1P16157 1881 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 SLC15A5A6NIM6 579 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
SPIDR-227ENST00000541342 OAS1P00973 400 aaKnown RBP18.22■□□□□ 0.51
SPIDR-227ENST00000541342 CREB1P16220 341 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 PROZP22891 400 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 GCNT1Q02742 428 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 MBTD1Q05BQ5 628 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 SCLT1Q96NL6 688 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 ABHD16BQ9H3Z7 469 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 IFT122Q9HBG6 1241 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 PTPRHQ9HD43 1115 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
SPIDR-227ENST00000541342 AGAP1Q9UPQ3 857 aa18.22■□□□□ 0.51
SPIDR-227ENST00000541342 RASGRF2O14827 1237 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 FMO1Q01740 532 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 MCL1Q07820 350 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 MORN1Q5T089 497 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 CCDC105Q8IYK2 499 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 CALCAP01258 141 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 MMP3P08254 477 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 CYP11B1P15538 503 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 GBP1P32455 592 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 PIK3CAP42336 1068 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 SEL1L2Q5TEA6 688 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 TSHZ1Q6ZSZ6 1077 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 BRSK2Q8IWQ3 736 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 C12orf50Q8NA57 414 aaPredicted RBP18.21■□□□□ 0.51
SPIDR-227ENST00000541342 APOBEC3GQ9HC16 384 aaKnown RBP18.21■□□□□ 0.51
SPIDR-227ENST00000541342 PARP2Q9UGN5 583 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 FOXO6A8MYZ6 492 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 INO80B-WBP1J3KQ70 363 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 ACKR2O00590 384 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 RDXP35241 583 aaKnown RBP18.21■□□□□ 0.51
SPIDR-227ENST00000541342 TFDP1Q14186 410 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 LONRF1Q17RB8 773 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 PRAMEF19Q5SWL8 479 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 CDR2LQ86X02 465 aaPredicted RBP18.21■□□□□ 0.51
SPIDR-227ENST00000541342 CEP57Q86XR8 500 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 ANKS4BQ8N8V4 417 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 NUP85Q9BW27 656 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 INO80BQ9C086 356 aaPredicted RBP18.21■□□□□ 0.51
SPIDR-227ENST00000541342 C1orf112Q9NSG2 853 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 FLRT1Q9NZU1 646 aa18.21■□□□□ 0.51
SPIDR-227ENST00000541342 H3BRB1 525 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 CYP1A2P05177 515 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 SLMAPQ14BN4 828 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 ZNF564Q8TBZ8 553 aaPredicted RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 DDX1Q92499 740 aaKnown RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 PPP1R16BQ96T49 567 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 ATP6V1G2O95670 118 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 GZMAP12544 262 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 HOXD8P13378 290 aaPredicted RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 HIBCHQ6NVY1 386 aaPredicted RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 TRPM8Q7Z2W7 1104 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 CDC42EP4Q9H3Q1 356 aaKnown RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 CPSF3Q9UKF6 684 aaKnown RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 OGTO15294 1046 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 GSTA1P08263 222 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 VIMP08670 466 aaKnown RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
SPIDR-227ENST00000541342 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 CCDC25Q86WR0 208 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
SPIDR-227ENST00000541342 SNX3O60493 162 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 CHKAP35790 457 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 LRRC14Q15048 493 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 E2F5Q15329 346 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 ATF7IP2Q5U623 682 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 RHBDF2Q6PJF5 856 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 CCDC50Q8IVM0 306 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 LRRC19Q9H756 370 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 VTNP04004 478 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 PPP1R7Q15435 360 aa18.19■□□□□ 0.5
SPIDR-227ENST00000541342 FAM133BQ5BKY9 247 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms