RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 AZIN2Q96A70 460 aa15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 DYDC2Q96IM9 177 aa15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 GMLQ99445 158 aa15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 DMAP1Q9NPF5 467 aaPredicted RBP15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 ZNF277Q9NRM2 450 aaPredicted RBP15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 ARMCX1Q9P291 453 aa15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 STX18Q9P2W9 335 aaKnown RBP15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 ZNF70Q9UC06 446 aaPredicted RBP15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 GTF3C4Q9UKN8 822 aa15.68■□□□□ 0.1
AC005840.4-201ENST00000541242 CNTNAP1P78357 1384 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 GZMAP12544 262 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 NOP14P78316 857 aaKnown RBP15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 DYNC1I2Q13409 638 aaKnown RBP15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 Q4G0T1 1027 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 FBXO27Q8NI29 283 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 PLEKHO2Q8TD55 490 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 NSL1Q96IY1 281 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 CFAP57Q96MR6 1250 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 FHDC1Q9C0D6 1143 aaPredicted RBP15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 ANKFY1Q9P2R3 1169 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 USP1O94782 785 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 SCNN1BP51168 640 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 MTM1Q13496 603 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 IZUMO2Q6UXV1 221 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 RIBC1Q8N443 379 aaPredicted RBP15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 DHX38Q92620 1227 aaKnown RBP15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 PLVAPQ9BX97 442 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 KLHL11Q9NVR0 708 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 SLC17A7Q9P2U7 560 aa15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 SMG5Q9UPR3 1016 aaKnown RBP15.67■□□□□ 0.1
AC005840.4-201ENST00000541242 TROVE2P10155 538 aaKnown RBP eCLIP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 ADSSP30520 456 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 VAMP7P51809 220 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 ZBTB16Q05516 673 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 MDH1BQ5I0G3 518 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 C1orf220Q5T0J3 134 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 SYDE1Q6ZW31 735 aaPredicted RBP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 ANKMY2Q8IV38 441 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 CLPTM1LQ96KA5 538 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 FAM161BQ96MY7 647 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 CYTH2Q99418 400 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 SPATA16Q9BXB7 569 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 PDP2Q9P2J9 529 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 WRAP73Q9P2S5 460 aaPredicted RBP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 HERC5Q9UII4 1024 aaKnown RBP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 COL2A1P02458 1487 aaPredicted RBP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 PSME4Q14997 1843 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 GOLGA8SH3BPF8 625 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 GOLGA8MH3BSY2 632 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 SLC26A4O43511 780 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 SLITRK3O94933 977 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 VIL1P09327 827 aaKnown RBP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 CYP11B1P15538 503 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 NFIL3Q16649 462 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 FAM71AQ8IYT1 594 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 ZBED8Q8IZ13 594 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 ZCCHC9Q8N567 271 aaKnown RBP15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 CBWD1Q9BRT8 395 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 TMEM117Q9H0C3 514 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 UVRAGQ9P2Y5 699 aa15.66■□□□□ 0.1
AC005840.4-201ENST00000541242 FOSP01100 380 aaPredicted RBP15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 FDX1P10109 184 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ESRRAP11474 423 aaPredicted RBP15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 CD58P19256 250 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 CIITAP33076 1130 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 STAT2P52630 851 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ZYXQ15942 572 aaKnown RBP15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TRIM74Q86UV6 250 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TRIM73Q86UV7 250 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TTLL6Q8N841 843 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 CCDC89Q8N998 374 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 FAM151AQ8WW52 585 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 DDX27Q96GQ7 796 aaKnown RBP15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TMEM120AQ9BXJ8 343 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TMEM39BQ9GZU3 492 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TMOD2Q9NZR1 351 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TMX2Q9Y320 296 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 GOLGA8IPA6NC78 632 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 GOLGA8JA6NMD2 632 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TBX3O15119 743 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ZWINTO95229 277 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ABHD2P08910 425 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 RFX1P22670 979 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 KLRC2P26717 231 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 MAN1A1P33908 653 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 PGM1P36871 562 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 CCNFP41002 786 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ZRSR2Q15696 482 aaKnown RBP15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 CCDC174Q6PII3 467 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ZNF276Q8N554 614 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TCP10LQ8TDR4 215 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 SEMA4DQ92854 862 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 OPTNQ96CV9 577 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 TTC1Q99614 292 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 FAM192AQ9GZU8 254 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 KCNK13Q9HB14 408 aa15.65■□□□□ 0.1
AC005840.4-201ENST00000541242 ZNF212Q9UDV6 495 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms