RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 DPYSL4O14531 572 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 FAM163BP0C2L3 166 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PSMC3P17980 439 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 DDX6P26196 483 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 CDC25CP30307 473 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PDE6CP51160 858 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 AP3M2P53677 418 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 MLLT6P55198 1093 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 RPL10AP62906 217 aaKnown RBP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 MLF2Q15773 248 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PRSS36Q5K4E3 855 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 CENPPQ6IPU0 288 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PARM1Q6UWI2 310 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 TOP6BLQ8N6T0 577 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 DTWD2Q8NBA8 298 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PRSS33Q8NF86 280 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 ITFG1Q8TB96 612 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 FAM200AQ8TCP9 573 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 LRRC15Q8TF66 581 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 NOC3LQ8WTT2 800 aaKnown RBP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 FGF14Q92915 247 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PSMG2Q969U7 264 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 CEP295NLQ96MC4 621 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 ACBD6Q9BR61 282 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 BRD9Q9H8M2 597 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 TRPV4Q9HBA0 871 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 ABCB6Q9NP58 842 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 HCFC1R1Q9NWW0 138 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 TFIP11Q9UBB9 837 aaKnown RBP11.19□□□□□ -0.62
CDCA3-208ENST00000540683 CA14Q9ULX7 337 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 YIPF1Q9Y548 306 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 PCDHB5Q9Y5E4 795 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 WDFY4Q6ZS81 3184 aa11.19□□□□□ -0.62
CDCA3-208ENST00000540683 TCHHQ07283 1943 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 KANSL1LA0AUZ9 987 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 PROB1E7EW31 1015 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 MEFVO15553 781 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-208ENST00000540683 KRT19P08727 400 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 MYL4P12829 197 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 ADSSP30520 456 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 GPC5P78333 572 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 NTHL1P78549 312 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 AMPD2Q01433 879 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 DUSP4Q13115 394 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 E2F4Q16254 413 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 MGAT5BQ3V5L5 792 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 SLC39A12Q504Y0 691 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 ZBTB41Q5SVQ8 909 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 IER5LQ5T953 404 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 RESP18Q5W5W9 173 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 C4orf50Q6ZRC1 276 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 WDR49Q8IV35 697 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 CSGALNACT2Q8N6G5 542 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 TMEM105Q8N8V8 129 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 LEO1Q8WVC0 666 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-208ENST00000540683 RSAD2Q8WXG1 361 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 MCRS1Q96EZ8 462 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 FUBP3Q96I24 572 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDCA3-208ENST00000540683 GTPBP4Q9BZE4 634 aaKnown RBP11.18□□□□□ -0.62
CDCA3-208ENST00000540683 ZCWPW1Q9H0M4 648 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 THG1LQ9NWX6 298 aaKnown RBP11.18□□□□□ -0.62
CDCA3-208ENST00000540683 GDAP2Q9NXN4 497 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 OBP2AQ9NY56 170 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 RCOR1Q9UKL0 485 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 AGAP1Q9UPQ3 857 aa11.18□□□□□ -0.62
CDCA3-208ENST00000540683 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-208ENST00000540683 MTMR11A4FU01 709 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 ZNF263O14978 683 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 NARSO43776 548 aaKnown RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 PRPF6O94906 941 aaKnown RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 SEC24AO95486 1093 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 PDGFBP01127 241 aaPredicted RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 ITGB3P05106 788 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CSH1P0DML2 217 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CSH2P0DML3 217 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CMA1P23946 247 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 WEE1P30291 646 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 NBL1P41271 181 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 TCF15Q12870 199 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 SNRNP35Q16560 246 aaKnown RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CWF19L1Q69YN2 538 aaKnown RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 SHC4Q6S5L8 630 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 ALYREFQ86V81 257 aaKnown RBP11.17□□□□□ -0.62
CDCA3-208ENST00000540683 C12orf56Q8IXR9 622 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 FSIP1Q8NA03 581 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 XXYLT1Q8NBI6 393 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 PJA1Q8NG27 643 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 CSGALNACT1Q8TDX6 532 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 ING5Q8WYH8 240 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 SPATA32Q96LK8 384 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 ASB16Q96NS5 453 aa11.17□□□□□ -0.62
CDCA3-208ENST00000540683 PGLYRP2Q96PD5 576 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms