RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RPA3P35244 121 aaPredicted RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 LIG4P49917 911 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 WNT7BP56706 349 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 GPS1Q13098 491 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 BZW1Q7L1Q6 419 aaKnown RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 INPP5DQ92835 1189 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 ATP6V0A1Q93050 837 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 XPNPEP1Q9NQW7 623 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 SLC24A2Q9UI40 661 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 FER1L6Q2WGJ9 1857 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 PI4K2BG5E9Z4 385 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 NDC80O14777 642 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 ETS1P14921 441 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 SSTR3P32745 418 aaPredicted RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 MCL1Q07820 350 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 FASTKD3Q14CZ7 662 aaKnown RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 LRRC38Q5VT99 294 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 XRRA1Q6P2D8 792 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 MFSD7Q6UXD7 560 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 AGBL3Q8NEM8 1001 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 LRRC8CQ8TDW0 803 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 ANKRD27Q96NW4 1050 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 SLCO1B3Q9NPD5 702 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 KLHL11Q9NVR0 708 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 ZNRF3Q9ULT6 936 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 STYXL1Q9Y6J8 313 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 TYROBPO43914 113 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 TMEM191BP0C7N4 346 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 KCNA3P22001 575 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 RPL7AP62424 266 aaKnown RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 CXCL9Q07325 125 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 ANKRD20A2Q5SQ80 823 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 ANKRD20A1Q5TYW2 823 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 ANKRD20A3Q5VUR7 823 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 RBBP8NLQ8NC74 664 aaPredicted RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 KIAA1683Q9H0B3 1180 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 VPS37BQ9H9H4 285 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 KCNG1Q9UIX4 513 aa12.98□□□□□ -0.33
NPC1-202ENST00000540608 AGO2Q9UKV8 859 aaKnown RBP12.98□□□□□ -0.33
NPC1-202ENST00000540608 PTPRJQ12913 1337 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 MAFGO15525 162 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 EGFRP00533 1210 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 KRT1P04264 644 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 CA4P22748 312 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 MMP8P22894 467 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 TBXAS1P24557 533 aaPredicted RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 ACOT2P49753 483 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 SLC1A5Q15758 541 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 SPDYAQ5MJ70 313 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 ZFYVE27Q5T4F4 411 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 CENPUQ71F23 418 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 VSIG10LQ86VR7 867 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 C4orf33Q8N1A6 199 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 GPRASP2Q96D09 838 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 POLR3FQ9H1D9 316 aaPredicted RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 HAO1Q9UJM8 370 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 PSAPP07602 524 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 T-ENOLP0DO92 83 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 TCF4P15884 667 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 ATF7P17544 494 aaPredicted RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 TARSP26639 723 aaKnown RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 PTPN7P35236 360 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 VCPP55072 806 aaKnown RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 MTMR2Q13614 643 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 SPOCD1Q6ZMY3 1216 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 ZBED8Q8IZ13 594 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 C10orf82Q8WW14 230 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 SSU72Q9NP77 194 aaKnown RBP12.97□□□□□ -0.33
NPC1-202ENST00000540608 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 CYLDQ9NQC7 956 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 CYP26B1Q9NR63 512 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 SHOC2Q9UQ13 582 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 RIPK3Q9Y572 518 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
NPC1-202ENST00000540608 ZBED4O75132 1171 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 ITGAVP06756 1048 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 DPEP1P16444 411 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 GNAZP19086 355 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 CCND2P30279 289 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 RASSF2P50749 326 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 HHATQ5VTY9 493 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 ZNF606Q8WXB4 792 aa12.96□□□□□ -0.33
NPC1-202ENST00000540608 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.33
NPC1-202ENST00000540608 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.33
NPC1-202ENST00000540608 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms