RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 RPL17P18621 184 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 SLC9A1P19634 815 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 SCP2P22307 547 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 APEX1P27695 318 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 HTR1BP28222 390 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 MTNR1BP49286 362 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ATXN1P54253 815 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 ALDH6A1Q02252 535 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 PSMD6Q15008 389 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 STILQ15468 1287 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 WDR72Q3MJ13 1102 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 CCDC30Q5VVM6 783 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 TIGD7Q6NT04 549 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 BORAQ6PGQ7 559 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 TMCO3Q6UWJ1 677 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 LCNL1Q6ZST4 164 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 KRT28Q7Z3Y7 464 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 PHYKPLQ8IUZ5 450 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 HSCBQ8IWL3 235 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 REXO1L1PQ8IX06 675 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 LMNTD2Q8IXW0 634 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 SYTL1Q8IYJ3 562 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 C7orf31Q8N865 590 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 MARCH10Q8NA82 808 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 ZCCHC14Q8WYQ9 949 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 ERCC4Q92889 916 aaPredicted RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 C16orf92Q96LL3 132 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 YTHDC1Q96MU7 727 aaKnown RBP6.82□□□□□ -1.32
MRE11-209ENST00000540013 NT5C1BQ96P26 610 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ACAP3Q96P50 834 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ZDHHC5Q9C0B5 715 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 CD248Q9HCU0 757 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 VPS45Q9NRW7 570 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 USP40Q9NVE5 1235 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 GRHPRQ9UBQ7 328 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 SERPINB13Q9UIV8 391 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 ODF2LQ9ULJ1 636 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 PCDHGB2Q9Y5G2 931 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 SBNO1A3KN83 1393 aa6.82□□□□□ -1.32
MRE11-209ENST00000540013 FSD2A1L4K1 749 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 GTPBP10A4D1E9 387 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 A6NLC8 198 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 FFAR2O15552 330 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 TRIM13O60858 407 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 NDUFS2O75306 463 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 FGF18O76093 207 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 IL18BPO95998 194 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 BMP7P18075 431 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 PDIA3P30101 505 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 MC4RP32245 332 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 PIK3CAP42336 1068 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 RBM6P78332 1123 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 SMAD3P84022 425 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 KIF23Q02241 960 aaPredicted RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 ZNF543Q08ER8 600 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 GRM1Q13255 1194 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 RTP5Q14D33 572 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 POSTNQ15063 836 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 PDCD1Q15116 288 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 HIBCHQ6NVY1 386 aaPredicted RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 RTN4RL1Q86UN2 441 aaPredicted RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 KLHL36Q8N4N3 616 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 MSL3Q8N5Y2 521 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 ZNF713Q8N859 430 aaPredicted RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 TXNDC5Q8NBS9 432 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 AFAP1L1Q8TED9 768 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 MAML3Q96JK9 1138 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 ZCCHC4Q9H5U6 513 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 ZCCHC17Q9NP64 241 aaKnown RBP6.81□□□□□ -1.32
MRE11-209ENST00000540013 GGA3Q9NZ52 723 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 GPR34Q9UPC5 381 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 CORO2BQ9UQ03 480 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 RGS12O14924 1447 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 ATRNO75882 1429 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 ARHGEF10O15013 1369 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 ALS2Q96Q42 1657 aa6.81□□□□□ -1.32
MRE11-209ENST00000540013 ATP7BP35670 1465 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 A0A1B0GTL3 188 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 MROH6A6NGR9 719 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 MPIG6BO95866 241 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 PRLP01236 227 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 THP07101 528 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 MYF5P13349 255 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 XBP1P17861 261 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 IL12RB1P42701 662 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 MMP14P50281 582 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 DCAF7P61962 342 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 PLIN5Q00G26 463 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 NFATC3Q12968 1075 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 PLCB4Q15147 1175 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 MEA1Q16626 185 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 UAP1L1Q3KQV9 507 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 LMBRD2Q68DH5 695 aaPredicted RBP6.8□□□□□ -1.32
MRE11-209ENST00000540013 MCTP2Q6DN12 878 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 APOA5Q6Q788 366 aa6.8□□□□□ -1.32
MRE11-209ENST00000540013 CCDC129Q6ZRS4 1044 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms