RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PHF13Q86YI8 300 aaPredicted RBP17.96■□□□□ 0.47
COPS3-212ENST00000539941 MCOLN2Q8IZK6 566 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 C18orf25Q96B23 403 aaPredicted RBP17.96■□□□□ 0.47
COPS3-212ENST00000539941 ZNF653Q96CK0 615 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 OSBPL9Q96SU4 736 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 SDCBP2Q9H190 292 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 UNC93B1Q9H1C4 597 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 SLC38A7Q9NVC3 462 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CTTNBP2NLQ9P2B4 639 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 PUF60Q9UHX1 559 aaKnown RBP17.96■□□□□ 0.47
COPS3-212ENST00000539941 BARX2Q9UMQ3 279 aaPredicted RBP17.96■□□□□ 0.47
COPS3-212ENST00000539941 GIT1Q9Y2X7 761 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 PDE4DIPQ5VU43 2346 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CALCAP01258 141 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CKBP12277 381 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CDH5P33151 784 aaPredicted RBP17.96■□□□□ 0.47
COPS3-212ENST00000539941 RAD23BP54727 409 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 ZNF618Q5T7W0 954 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 C11orf63Q6NUN7 778 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CAGE1Q8TC20 777 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CYFIP2Q96F07 1278 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 RPGRIP1Q96KN7 1286 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 OSGEPQ9NPF4 335 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 KLK14Q9P0G3 267 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 KIAA1257Q9ULG3 409 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CEP83Q9Y592 693 aa17.96■□□□□ 0.47
COPS3-212ENST00000539941 CES2O00748 559 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 FTCDO95954 541 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 LRPAP1P30533 357 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 RAP1GAPP47736 663 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 C1QBPQ07021 282 aaKnown RBP17.95■□□□□ 0.46
COPS3-212ENST00000539941 NAA35Q5VZE5 725 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 FAM43BQ6ZT52 329 aaPredicted RBP17.95■□□□□ 0.46
COPS3-212ENST00000539941 MON1BQ7L1V2 547 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 PEX26Q7Z412 305 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 DAAM2Q86T65 1068 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 TMEM130Q8N3G9 435 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 WHAMMQ8TF30 809 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 TMEM176AQ96HP8 235 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 PPP1R10Q96QC0 940 aaKnown RBP17.95■□□□□ 0.46
COPS3-212ENST00000539941 TRPV6Q9H1D0 765 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 ABCB6Q9NP58 842 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 RNF14Q9UBS8 474 aa17.95■□□□□ 0.46
COPS3-212ENST00000539941 SCN1AP35498 2009 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 CTAGE15A4D2H0 777 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 PTGESO14684 152 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 BUB1BO60566 1050 aaPredicted RBP17.94■□□□□ 0.46
COPS3-212ENST00000539941 CTAGE8P0CG41 777 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 BRD2P25440 801 aaKnown RBP17.94■□□□□ 0.46
COPS3-212ENST00000539941 CDK7P50613 346 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 CDH8P55286 799 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 RPS6KA1Q15418 735 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 ZNF394Q53GI3 561 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 LIN9Q5TKA1 542 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 TMCO3Q6UWJ1 677 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 CTAGE6Q86UF2 777 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 CTAGE4Q8IX94 777 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 SLC4A11Q8NBS3 891 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 TMEM35BQ8NCS4 154 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 CPA5Q8WXQ8 436 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 MMS19Q96T76 1030 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 LHX5Q9H2C1 402 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 GDAP2Q9NXN4 497 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 CNOT8Q9UFF9 292 aaKnown RBP17.94■□□□□ 0.46
COPS3-212ENST00000539941 OGDHLQ9ULD0 1010 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 COG5Q9UP83 839 aa17.94■□□□□ 0.46
COPS3-212ENST00000539941 A0A0U1RQF3 1178 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 CLGNO14967 610 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 NCK2O43639 380 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 KIF4AO95239 1232 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 GTF2A1P52655 376 aaPredicted RBP17.93■□□□□ 0.46
COPS3-212ENST00000539941 SV2CQ496J9 727 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 TRAF7Q6Q0C0 670 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 NT5DC3Q86UY8 548 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 ZNF564Q8TBZ8 553 aaPredicted RBP17.93■□□□□ 0.46
COPS3-212ENST00000539941 UBXN4Q92575 508 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 GOLGA1Q92805 767 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 PGBD4Q96DM1 585 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 ZSWIM1Q9BR11 485 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 NUP85Q9BW27 656 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 UBN1Q9NPG3 1134 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 RSPH14Q9UHP6 348 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 AMFRQ9UKV5 643 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 STXBP5LQ9Y2K9 1186 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 SNX9Q9Y5X1 595 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 PPEF2O14830 753 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 SRGAP2O75044 1071 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 CFHP08603 1231 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 VDRP11473 427 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 CCL5P13501 91 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 CD19P15391 556 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 TAF6P49848 677 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 STILQ15468 1287 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 ICE2Q659A1 982 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 RSRC2Q7L4I2 434 aaKnown RBP17.93■□□□□ 0.46
COPS3-212ENST00000539941 ZNF572Q7Z3I7 529 aaPredicted RBP17.93■□□□□ 0.46
COPS3-212ENST00000539941 UNC93AQ86WB7 457 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 LRRN4CLQ8ND94 238 aa17.93■□□□□ 0.46
COPS3-212ENST00000539941 TFAP2BQ92481 460 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms