RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 LONP2Q86WA8 852 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 NRBF2Q96F24 287 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 AK9Q5TCS8 1911 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 DNAJC8O75937 253 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 HADHAP40939 763 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 MXD4Q14582 209 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 DGKDQ16760 1214 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 LRRC71Q8N4P6 559 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 SEPT1Q8WYJ6 367 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 FBXO28Q9NVF7 368 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 WDR35Q9P2L0 1181 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TPI1P60174 286 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 PKN1Q16512 942 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TRPM8Q7Z2W7 1104 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TNIP3Q96KP6 325 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 FAM49BQ9NUQ9 324 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 PCMTD2Q9NV79 361 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 CST8O60676 142 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 RBP5P82980 135 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TMEM132DQ14C87 1099 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 PDCD2Q16342 344 aaPredicted RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 RABGAP1LQ5R372 815 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 C3orf62Q6ZUJ4 267 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 SHCBP1Q8NEM2 672 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 SGSM3Q96HU1 749 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TAAR1Q96RJ0 339 aa15.24■□□□□ 0.03
CACNB1-206ENST00000539338 TARS2Q9BW92 718 aaKnown RBP15.24■□□□□ 0.03
CACNB1-206ENST00000539338 E2F8A0AVK6 867 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 ZNF200P98182 395 aaPredicted RBP15.23■□□□□ 0.03
CACNB1-206ENST00000539338 C2CD6Q53TS8 623 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 CYP4A22Q5TCH4 519 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 BTBD8Q5XKL5 378 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 TMEM169Q96HH4 297 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 NEMP1O14524 444 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 STRNO43815 780 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 GNRH1P01148 92 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 FGFR2P21802 821 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
CACNB1-206ENST00000539338 PTK7Q13308 1070 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 NDUFAF2Q8N183 169 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 SPATA18Q8TC71 538 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 PLEKHA5Q9HAU0 1116 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 ENTPD7Q9NQZ7 604 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 MCF2P10911 925 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 PMS1P54277 932 aaKnown RBP15.23■□□□□ 0.03
CACNB1-206ENST00000539338 TMEM62Q0P6H9 643 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 HIC1Q14526 733 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
CACNB1-206ENST00000539338 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
CACNB1-206ENST00000539338 TXNRD3Q86VQ6 643 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 DDIASQ8IXT1 998 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 GPRC5CQ9NQ84 441 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 E5RI56 91 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 SETSIPP0DME0 302 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 PYGBP11216 843 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 CDK17Q00537 523 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 PPATQ06203 517 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 GLB1LQ6UWU2 654 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 UBA3Q8TBC4 463 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 USP33Q8TEY7 942 aa15.23■□□□□ 0.03
CACNB1-206ENST00000539338 RRN3P2A6NIE6 340 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 FARP2O94887 1054 aaPredicted RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 SGPL1O95470 568 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 FAM107AO95990 144 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ATXN3P54252 364 aaPredicted RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 CAPRIN1Q14444 709 aaKnown RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 SEZ6Q53EL9 994 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 DNAAF5Q86Y56 855 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 SLC13A5Q86YT5 568 aaPredicted RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ICA1LQ8NDH6 482 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 AGXT2Q9BYV1 514 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ING2Q9H160 280 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 WARS2Q9UGM6 360 aaKnown RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 IGSF9BQ9UPX0 1349 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 NKRFO15226 690 aaKnown RBP eCLIP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 P4HA2O15460 535 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 EXTL3O43909 919 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 WDR93Q6P2C0 686 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ANO5Q75V66 913 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 CDR2LQ86X02 465 aaPredicted RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ULK4Q96C45 1275 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 CARD9Q9H257 536 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 RANBP17Q9H2T7 1088 aaKnown RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 SLIT1O75093 1534 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 NFIAQ12857 509 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 IMPG1Q17R60 797 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 LRRN4CLQ8ND94 238 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 RNF217Q8TC41 542 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 TBX20Q9UMR3 447 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 RPS6P62753 249 aaKnown RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 STX3Q13277 289 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ATG4AQ8WYN0 398 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ZSWIM1Q9BR11 485 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ROPN1BQ9BZX4 212 aaPredicted RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ROPN1Q9HAT0 212 aaPredicted RBP15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ARHGAP20Q9P2F6 1191 aa15.22■□□□□ 0.03
CACNB1-206ENST00000539338 ANP32DO95626 131 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms