RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 F5H697 171 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 F2RL2O00254 374 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
CCDC7-209ENST00000539197 CHRM3P20309 590 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 CTGFP29279 349 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 PCBP2Q15366 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC7-209ENST00000539197 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
CCDC7-209ENST00000539197 CCDC93Q567U6 631 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 VGLL2Q8N8G2 317 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 COA7Q96BR5 231 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 ALG8Q9BVK2 526 aa6.83□□□□□ -1.32
CCDC7-209ENST00000539197 CCDC8Q9H0W5 538 aaPredicted RBP6.83□□□□□ -1.32
CCDC7-209ENST00000539197 ZNF804BA4D1E1 1349 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 FZD9O00144 591 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 POLRMTO00411 1230 aaKnown RBP6.82□□□□□ -1.32
CCDC7-209ENST00000539197 TRIAP1O43715 76 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 PHKA1P46020 1223 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 EIF2B5Q13144 721 aaKnown RBP6.82□□□□□ -1.32
CCDC7-209ENST00000539197 SNAPC2Q13487 334 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 MTX3Q5HYI7 312 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 C9orf106Q8NAJ2 232 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 TPSD1Q9BZJ3 242 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 PUS7LQ9H0K6 701 aaKnown RBP6.82□□□□□ -1.32
CCDC7-209ENST00000539197 ETAA1Q9NY74 926 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 AGAP1Q9UPQ3 857 aa6.82□□□□□ -1.32
CCDC7-209ENST00000539197 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC7-209ENST00000539197 KLHL33A6NCF5 533 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 NT5C1B-RDH14C9J2C7 533 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 VPS4BO75351 444 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 RPLP2P05387 115 aaKnown RBP6.81□□□□□ -1.32
CCDC7-209ENST00000539197 PDHA1P08559 390 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 EBLN1P0CF75 366 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 MYBL2P10244 700 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 MALP21145 153 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 DRD4P21917 467 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 NDUFV1P49821 464 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 CCT8P50990 548 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 PLAC9Q5JTB6 97 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 SCAMP4Q969E2 229 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 FKBP10Q96AY3 582 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 TEKT5Q96M29 485 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 OSBPL9Q96SU4 736 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 AMBRA1Q9C0C7 1298 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 MAN1C1Q9NR34 630 aa6.81□□□□□ -1.32
CCDC7-209ENST00000539197 TP73O15350 636 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 HNRNPCP07910 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
CCDC7-209ENST00000539197 NHLRC4P0CG21 123 aaPredicted RBP6.8□□□□□ -1.32
CCDC7-209ENST00000539197 PCSK6P29122 969 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 DSC2Q02487 901 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 MAPK7Q13164 816 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 PDSS2Q86YH6 399 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 PSD4Q8NDX1 1056 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 NSUN6Q8TEA1 469 aaKnown RBP6.8□□□□□ -1.32
CCDC7-209ENST00000539197 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 ACTRT3Q9BYD9 372 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 SLAMF7Q9NQ25 335 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 EHD3Q9NZN3 535 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 MCM8Q9UJA3 840 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 TRHDEQ9UKU6 1024 aa6.8□□□□□ -1.32
CCDC7-209ENST00000539197 GJB1P08034 283 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 PRR35P0CG20 571 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 JUPP14923 745 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 ZFXP17010 805 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-209ENST00000539197 SSBP2P81877 361 aaPredicted RBP6.79□□□□□ -1.32
CCDC7-209ENST00000539197 UAP1L1Q3KQV9 507 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 ZNF626Q68DY1 528 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 SEMA4CQ9C0C4 833 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 BRD9Q9H8M2 597 aa6.79□□□□□ -1.32
CCDC7-209ENST00000539197 TARM1B6A8C7 271 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 GNAI3P08754 354 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 TOB1P50616 345 aaPredicted RBP6.78□□□□□ -1.32
CCDC7-209ENST00000539197 ZNF135P52742 658 aaPredicted RBP6.78□□□□□ -1.32
CCDC7-209ENST00000539197 GNAI1P63096 354 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 MTMR1Q13613 665 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 BMPR2Q13873 1038 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 ODF1Q14990 250 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
CCDC7-209ENST00000539197 VPS53Q5VIR6 699 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 SLC4A10Q6U841 1118 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 ZNF66Q6ZN08 573 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 TMX1Q9H3N1 280 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 SERHLQ9NQF3 203 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 GNL3LQ9NVN8 582 aaKnown RBP6.78□□□□□ -1.32
CCDC7-209ENST00000539197 RLIMQ9NVW2 624 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 SIDT1Q9NXL6 827 aaKnown RBP6.78□□□□□ -1.32
CCDC7-209ENST00000539197 PRKAB1Q9Y478 270 aa6.78□□□□□ -1.32
CCDC7-209ENST00000539197 SOAT2O75908 522 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 KIF20AO95235 890 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 CHEK2O96017 543 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 KELP23276 732 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 CYP2C19P33261 490 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 PTGER1P34995 402 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 KLF9Q13886 244 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-209ENST00000539197 HABP2Q14520 560 aaPredicted RBP6.77□□□□□ -1.33
CCDC7-209ENST00000539197 TBCCQ15814 346 aa6.77□□□□□ -1.33
CCDC7-209ENST00000539197 ZNF551Q7Z340 670 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms