RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 CLTCQ00610 1675 aaKnown RBP2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 RIMS1Q86UR5 1692 aaKnown RBP2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PLA2R1Q13018 1463 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 RPRD2Q5VT52 1461 aaKnown RBP2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 IFT172Q9UG01 1749 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 CCDC163A0A0D9SF12 145 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 ZNF891A8MT65 544 aaPredicted RBP2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 SOCS2O14508 198 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PLD2O14939 933 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 GAS7O60861 476 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PHF2O75151 1096 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 TUBB4AP04350 444 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 ALPLP05186 524 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 NR2F6P10588 404 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 FCER1AP12319 257 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PPP3CBP16298 524 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 SCNN1BP51168 640 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 LGALS4P56470 323 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PER3P56645 1201 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 SLFN5Q08AF3 891 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PITRM1Q5JRX3 1037 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PRAMEF17Q5VTA0 474 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 Q6ZVL8 140 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 OR7D4Q8NG98 312 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 TBC1D15Q8TC07 691 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 RSAD2Q8WXG1 361 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 DEPDC7Q96QD5 511 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 DNAJC7Q99615 494 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 SENP6Q9GZR1 1112 aaPredicted RBP2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 KCTD10Q9H3F6 313 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 TXLNGQ9NUQ3 528 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 TRNAU1APQ9NX07 287 aaKnown RBP2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 MOCS1Q9NZB8 636 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 NR2E3Q9Y5X4 410 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 PTCH2Q9Y6C5 1203 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 MYO3AQ8NEV4 1616 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 KIF15Q9NS87 1388 aa2.6□□□□□ -1.99
CBX3P4-201ENST00000538909 NPATQ14207 1427 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 ANKRD50Q9ULJ7 1429 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 SETD1AO15047 1707 aaKnown RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 SPHKAPQ2M3C7 1700 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PTPRMP28827 1452 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 MYO5BQ9ULV0 1848 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 TRPM2O94759 1503 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PRAMEF33A0A0G2JMD5 474 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 A0A1W2PS29 197 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PRSS44E7EML9 344 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PRAMEF10O60809 474 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 GAS8-AS1O95177 125 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 IL2RBP14784 551 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 FPR1P21462 350 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 ECHS1P30084 290 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 MCAMP43121 646 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 THBS3P49746 956 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 HNRNPMP52272 730 aaKnown RBP eCLIP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 NANOS2P60321 138 aaKnown RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 CCT2P78371 535 aaKnown RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 Q4G0T1 1027 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PREPLQ4J6C6 727 aaPredicted RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 CLNKQ7Z7G1 428 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PQLC1Q8N2U9 271 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 LILRB2Q8N423 598 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 FITM2Q8N6M3 262 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 SLC43A3Q8NBI5 491 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 B3GALNT2Q8NCR0 500 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PRSS3P2Q8NHM4 247 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 NUP133Q8WUM0 1156 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 RIN2Q8WYP3 895 aaPredicted RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 TMEM79Q9BSE2 394 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 GSTO2Q9H4Y5 243 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 BCO1Q9HAY6 547 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 PDGFCQ9NRA1 345 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 SIRPGQ9P1W8 387 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 SLC23A1Q9UHI7 598 aa2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 RUVBL1Q9Y265 456 aaKnown RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 CCDC9Q9Y3X0 531 aaKnown RBP2.59□□□□□ -1.99
CBX3P4-201ENST00000538909 KAT6AQ92794 2004 aa2.59□□□□□ -2
CBX3P4-201ENST00000538909 ANKRD30AQ9BXX3 1397 aa2.59□□□□□ -2
CBX3P4-201ENST00000538909 UBR1Q8IWV7 1749 aa2.59□□□□□ -2
CBX3P4-201ENST00000538909 STRCQ7RTU9 1775 aa2.59□□□□□ -2
CBX3P4-201ENST00000538909 CNTLNQ9NXG0 1405 aa2.59□□□□□ -2
CBX3P4-201ENST00000538909 ERVK-7P63135 1459 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 LMTK3Q96Q04 1460 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 ARHGAP23Q9P227 1491 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 ADGRB3O60242 1522 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 UGGT1Q9NYU2 1555 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 TMEM131LA2VDJ0 1609 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 CLTCL1P53675 1640 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 NRXN3Q9Y4C0 1643 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 TCRBV7S2A1N4TA0A589 114 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 PRRT4C9JH25 899 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 KRT86O43790 486 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 KDM1AO60341 852 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 RHOP08100 348 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 SDSP20132 328 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 HTR6P50406 440 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 RPS7P62081 194 aaKnown RBP2.58□□□□□ -2
CBX3P4-201ENST00000538909 KRT81Q14533 505 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 ZNF610Q8N9Z0 462 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms