RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PTPN20Q4JDL3 420 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 FAM182AQ5T1J6 154 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 ZNF618Q5T7W0 954 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 TXNRD3NBQ6F5E7 133 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 GDF6Q6KF10 455 aaPredicted RBP15.01□□□□□ -0.01
ACTN1-205ENST00000538545 SLC27A1Q6PCB7 646 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 HDXQ7Z353 690 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 ZNF677Q86XU0 584 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 CARD9Q9H257 536 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 TMEM88BA6NKF7 163 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 NDST1P52848 882 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 FAM81BQ96LP2 452 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 ZFP42Q96MM3 310 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 ASB7Q9H672 318 aa15.01□□□□□ -0.01
ACTN1-205ENST00000538545 A0A0U1RQG5 324 aaPredicted RBP15□□□□□ -0.01
ACTN1-205ENST00000538545 F8VP50 259 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 PI4K2BG5E9Z4 385 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 TULP2O00295 520 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 MTA2O94776 668 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 MMP8P22894 467 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 FLT3P36888 993 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 GRM5P41594 1212 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 TNNC1P63316 161 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 TUBB4BP68371 445 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 SOX4Q06945 474 aaPredicted RBP15□□□□□ -0.01
ACTN1-205ENST00000538545 ZNF252P-AS1Q0IIN9 211 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 EMC1Q8N766 993 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 AENQ8WTP8 325 aaKnown RBP15□□□□□ -0.01
ACTN1-205ENST00000538545 MRPL45Q9BRJ2 306 aaKnown RBP15□□□□□ -0.01
ACTN1-205ENST00000538545 BCO2Q9BYV7 579 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 FAM49BQ9NUQ9 324 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 PTPN22Q9Y2R2 807 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 DAPK3O43293 454 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 SNX1Q13596 522 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 HLTFQ14527 1009 aaKnown RBP eCLIP15□□□□□ -0.01
ACTN1-205ENST00000538545 TTC27Q6P3X3 843 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 NOTUMQ6P988 496 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 UBL4BQ8N7F7 174 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 ATG4AQ8WYN0 398 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 HEXIM2Q96MH2 286 aaKnown RBP15□□□□□ -0.01
ACTN1-205ENST00000538545 CPXM1Q96SM3 734 aa15□□□□□ -0.01
ACTN1-205ENST00000538545 TRPA1O75762 1119 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 CYP3A5P20815 502 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 CTNNA1P35221 906 aaKnown RBP14.99□□□□□ -0.01
ACTN1-205ENST00000538545 FCGRTP55899 365 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 PPARDQ03181 441 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 PRELID2Q8N945 189 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 C1orf54Q8WWF1 131 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 PIWIL1Q96J94 861 aaKnown RBP14.99□□□□□ -0.01
ACTN1-205ENST00000538545 CES2O00748 559 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 DUSP11O75319 330 aaKnown RBP14.99□□□□□ -0.01
ACTN1-205ENST00000538545 CILPO75339 1184 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 MYCP01106 439 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-205ENST00000538545 UBXN11Q5T124 520 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 TWF2Q6IBS0 349 aaKnown RBP14.99□□□□□ -0.01
ACTN1-205ENST00000538545 FAM228AQ86W67 206 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 PHF13Q86YI8 300 aaPredicted RBP14.99□□□□□ -0.01
ACTN1-205ENST00000538545 JOSD2Q8TAC2 188 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 LPPQ93052 612 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 SNX27Q96L92 541 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 RPS6KC1Q96S38 1066 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 GDF3Q9NR23 364 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 PCDHA3Q9Y5H8 950 aa14.99□□□□□ -0.01
ACTN1-205ENST00000538545 PTPN11Q06124 597 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-205ENST00000538545 RAB6CQ53S08 254 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ZFYVE27Q5T4F4 411 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ACOT1Q86TX2 421 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ERICH1Q86X53 443 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 RNF25Q96BH1 459 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-205ENST00000538545 RAB6CQ9H0N0 254 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 DPEP3Q9H4B8 488 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 HPCAL4Q9UM19 191 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 M0QYV0 167 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 SPTLC1O15269 473 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 GRAP2O75791 330 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 PDGFRBP09619 1106 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 RARAP10276 462 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
ACTN1-205ENST00000538545 RGS7P49802 495 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ADCY2Q08462 1091 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 PDE4CQ08493 712 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 TCEAL1Q15170 157 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 PLEKHA7Q6IQ23 1121 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 TMEM176AQ96HP8 235 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 CDY2AQ9Y6F7 541 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 MICAL2O94851 1124 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ERBB2P04626 1255 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ASGR1P07306 291 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 ECHS1P30084 290 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 POU5F1Q01860 360 aaKnown RBP14.98□□□□□ -0.01
ACTN1-205ENST00000538545 LIN9Q5TKA1 542 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 PRUNE1Q86TP1 453 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 CCDC50Q8IVM0 306 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 TMEM35BQ8NCS4 154 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 AVENQ9NQS1 362 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-205ENST00000538545 IPPQ9Y573 584 aa14.98□□□□□ -0.01
ACTN1-205ENST00000538545 SCN10AQ9Y5Y9 1956 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 SMIM28A0A1B0GU29 152 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms