RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KIAA1841Q6NSI8 718 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 DPY19L2P1Q6NXN4 242 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 APTXQ7Z2E3 356 aaKnown RBP14.06□□□□□ -0.16
CHFR-216ENST00000538235 DHX40Q8IX18 779 aaKnown RBP14.06□□□□□ -0.16
CHFR-216ENST00000538235 GPR65Q8IYL9 337 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 KAT5Q92993 513 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 TWNKQ96RR1 684 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 DPEP3Q9H4B8 488 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 AJAP1Q9UKB5 411 aaPredicted RBP14.06□□□□□ -0.16
CHFR-216ENST00000538235 COQ4Q9Y3A0 265 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
CHFR-216ENST00000538235 VCANP13611 3396 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 KCNA5P22460 613 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 NOP14P78316 857 aaKnown RBP14.05□□□□□ -0.16
CHFR-216ENST00000538235 YWHAHQ04917 246 aaPredicted RBP14.05□□□□□ -0.16
CHFR-216ENST00000538235 ORC1Q13415 861 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 RAB33AQ14088 237 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 IQCB1Q15051 598 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 SASS6Q6UVJ0 657 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 TMEM184AQ6ZMB5 413 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 RNF19BQ6ZMZ0 732 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 ANKS3Q6ZW76 656 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 ADGRF2Q8IZF7 708 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 AOPEPQ8N6M6 819 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.05□□□□□ -0.16
CHFR-216ENST00000538235 ENOX1Q8TC92 643 aaKnown RBP14.05□□□□□ -0.16
CHFR-216ENST00000538235 TATDN2Q93075 761 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
CHFR-216ENST00000538235 RHOBTB2Q9BYZ6 727 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 S1PR5Q9H228 398 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 CRTAC1Q9NQ79 661 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 MAN1C1Q9NR34 630 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 TMEM30AQ9NV96 361 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 ANO10Q9NW15 660 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 FANCLQ9NW38 375 aa14.05□□□□□ -0.16
CHFR-216ENST00000538235 NXF1Q9UBU9 619 aaKnown RBP14.05□□□□□ -0.16
CHFR-216ENST00000538235 TRAPPC3O43617 180 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 SOAT2O75908 522 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ABLIM3O94929 683 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ATP1A3P13637 1013 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ZNF18P17022 549 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 KLRC2P26717 231 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 PNPLA4P41247 253 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ARPP19P56211 112 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 PSMC1P62191 440 aaKnown RBP14.04□□□□□ -0.16
CHFR-216ENST00000538235 MYL7Q01449 175 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 KCNH2Q12809 1159 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
CHFR-216ENST00000538235 WDR72Q3MJ13 1102 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 KRT39Q6A163 491 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ZNF280DQ6N043 979 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ANKRD54Q6NXT1 300 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 POTEHQ6S545 545 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 TOP6BLQ8N6T0 577 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 UBR7Q8N806 425 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 STKLD1Q8NE28 680 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 WHAMMQ8TF30 809 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 PGLYRP2Q96PD5 576 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 BCO2Q9BYV7 579 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 ZCWPW1Q9H0M4 648 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 THAP9Q9H5L6 903 aa14.04□□□□□ -0.16
CHFR-216ENST00000538235 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
CHFR-216ENST00000538235 MTMR11A4FU01 709 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 PHACTR2O75167 634 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 PAPLNO95428 1278 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 GLUD1P00367 558 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 ADH1AP07327 375 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 WARSP23381 471 aaKnown RBP14.03□□□□□ -0.16
CHFR-216ENST00000538235 GTF2H1P32780 548 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 AP3M2P53677 418 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 APPL2Q8NEU8 664 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 CDCA3Q99618 268 aaPredicted RBP14.03□□□□□ -0.16
CHFR-216ENST00000538235 EMILIN2Q9BXX0 1053 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 METTL14Q9HCE5 456 aaKnown RBP14.03□□□□□ -0.16
CHFR-216ENST00000538235 SIX2Q9NPC8 291 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHFR-216ENST00000538235 DDX43Q9NXZ2 648 aaKnown RBP14.03□□□□□ -0.16
CHFR-216ENST00000538235 TAB2Q9NYJ8 693 aa14.03□□□□□ -0.16
CHFR-216ENST00000538235 MYBPHLA2RUH7 354 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 KCNJ18B7U540 433 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 CALCAP01258 141 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 IL9P15248 144 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 ATICP31939 592 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 GPR15P49685 360 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 MYL5Q02045 173 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 LRMPQ12912 555 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 TRPC3Q13507 836 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 KCNJ12Q14500 433 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 KRT31Q15323 416 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 PTPN21Q16825 1174 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 ZNF667Q5HYK9 610 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 INTS6LQ5JSJ4 861 aaKnown RBP14.02□□□□□ -0.17
CHFR-216ENST00000538235 RARS2Q5T160 578 aaKnown RBP14.02□□□□□ -0.17
CHFR-216ENST00000538235 GJB7Q6PEY0 223 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 EP400NLQ6ZTU2 488 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 ATAD1Q8NBU5 361 aa14.02□□□□□ -0.17
CHFR-216ENST00000538235 SMRP1Q8NCR6 262 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms