RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 PRPF4BQ13523 1007 aaKnown RBP22.7■■□□□ 1.22
TRIM3-214ENST00000536344 PEX26Q7Z412 305 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 HOOK3Q86VS8 718 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 OR5B17Q8NGF7 314 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 FBXO25Q8TCJ0 367 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 UTP4Q969X6 686 aaKnown RBP22.7■■□□□ 1.22
TRIM3-214ENST00000536344 SMARCAD1Q9H4L7 1026 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 VTNP04004 478 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 PYGLP06737 847 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 PMS2P54278 862 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 THNSL1Q8IYQ7 743 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 SEC14L1Q92503 715 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 GINS2Q9Y248 185 aa22.7■■□□□ 1.22
TRIM3-214ENST00000536344 USP15Q9Y4E8 981 aaPredicted RBP22.7■■□□□ 1.22
TRIM3-214ENST00000536344 CLDN3O15551 220 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 ATMINO43313 823 aaPredicted RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 OAS1P00973 400 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 KRT5P13647 590 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 IFI16Q16666 785 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 TDRD10Q5VZ19 366 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 RPUSD2Q8IZ73 545 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 MAML3Q96JK9 1138 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 ZDHHC18Q9NUE0 388 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 H2AFZP0C0S5 128 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 IQCF3P0C7M6 154 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 SMPD1P17405 629 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 FGFR4P22455 802 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 EIF3BP55884 814 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 SNRPFP62306 86 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 CNGA2Q16280 664 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 PPP1R15BQ5SWA1 713 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 H2AFVQ71UI9 128 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 TPCN2Q8NHX9 752 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 ARHGEF26Q96DR7 871 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 FAM167AQ96KS9 214 aa22.69■■□□□ 1.22
TRIM3-214ENST00000536344 PARK7Q99497 189 aaKnown RBP22.69■■□□□ 1.22
TRIM3-214ENST00000536344 LIN7AO14910 233 aaPredicted RBP22.68■■□□□ 1.22
TRIM3-214ENST00000536344 MSCO60682 206 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 NUGGCQ68CJ6 796 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 DENND2CQ68D51 928 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 PLPPR4Q7Z2D5 763 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 NOP9Q86U38 636 aaKnown RBP22.68■■□□□ 1.22
TRIM3-214ENST00000536344 HELQQ8TDG4 1101 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 MORC4Q8TE76 937 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 THAP2Q9H0W7 228 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 PABPC3Q9H361 631 aaKnown RBP22.68■■□□□ 1.22
TRIM3-214ENST00000536344 PRKCBP05771 671 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 GCLCP48506 637 aaPredicted RBP22.68■■□□□ 1.22
TRIM3-214ENST00000536344 MXRA7P84157 204 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 TMEM62Q0P6H9 643 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 TBC1D25Q3MII6 688 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 ASRGL1Q7L266 308 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 PHLDB2Q86SQ0 1253 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 ANKLE1Q8NAG6 615 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 SLC30A5Q8TAD4 765 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 RAB17Q9H0T7 212 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 FAM114A2Q9NRY5 505 aa22.68■■□□□ 1.22
TRIM3-214ENST00000536344 DIS3Q9Y2L1 958 aaKnown RBP22.68■■□□□ 1.22
TRIM3-214ENST00000536344 CCDC188H7C350 402 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 RTN3O95197 1032 aaPredicted RBP22.67■■□□□ 1.22
TRIM3-214ENST00000536344 ITGBL1O95965 494 aaPredicted RBP22.67■■□□□ 1.22
TRIM3-214ENST00000536344 ATP11AP98196 1134 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 MGAT5Q09328 741 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 IER5Q5VY09 327 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 PLEKHH3Q7Z736 793 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 PGM2Q96G03 612 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 NT5C1BQ96P26 610 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 AGPAT1Q99943 283 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 ERAP1Q9NZ08 941 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 A0A0B4J269 797 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 H0YCG3 227 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 CES2O00748 559 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 MAPK13O15264 365 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 ZNF211Q13398 564 aaPredicted RBP22.67■■□□□ 1.22
TRIM3-214ENST00000536344 CCL14Q16627 93 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 UMODL1Q5DID0 1318 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 TMEM192Q8IY95 271 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 TEKT4Q8WW24 435 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 DYDC1Q8WWB3 177 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 PCDHB18PQ96TA0 734 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 KATNBL1Q9H079 304 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 SLITRK6Q9H5Y7 841 aa22.67■■□□□ 1.22
TRIM3-214ENST00000536344 GH1P01241 217 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 GM2AP17900 193 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 LACTBP83111 547 aaPredicted RBP22.66■■□□□ 1.22
TRIM3-214ENST00000536344 C2CD6Q53TS8 623 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 RNF220Q5VTB9 566 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 EEF1DP3Q658K8 133 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 AADACL2Q6P093 401 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.66■■□□□ 1.22
TRIM3-214ENST00000536344 TMC2Q8TDI7 906 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 TMEM174Q8WUU8 243 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 MORF4L1Q9UBU8 362 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 AKT3Q9Y243 479 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 C2CD2Q9Y426 696 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 HLA-DRAP01903 254 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 NUDT17P0C025 328 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 PIK3CAP42336 1068 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 PDE6CP51160 858 aa22.66■■□□□ 1.22
TRIM3-214ENST00000536344 SLC5A9Q2M3M2 681 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms