RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 FTHL17Q9BXU8 183 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CHORDC1Q9UHD1 332 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ATP11BQ9Y2G3 1177 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NME7Q9Y5B8 376 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ATMINO43313 823 aaPredicted RBP21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PAEPP09466 180 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 NOP2P46087 812 aaKnown RBP21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CLCNKBP51801 687 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 TCTN1Q2MV58 587 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SV2CQ496J9 727 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 C1orf53Q5VUE5 145 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SMYD5Q6GMV2 418 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 SLC35G2Q8TBE7 412 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 PAWRQ96IZ0 340 aaKnown RBP21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 ALS2CR12Q96Q35 445 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 UBN1Q9NPG3 1134 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 GDAP2Q9NXN4 497 aa21.65■■□□□ 1.06
TNFRSF1A-205ENST00000534885 CASTOR2A6NHX0 329 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PALMO75781 387 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ATP1A1P05023 1023 aaKnown RBP21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CENPCQ03188 943 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TRIM72Q6ZMU5 477 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PCDHGC5Q9Y5F6 944 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GRID2IPA4D2P6 1211 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 EOMESO95936 686 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CYP2C18P33260 490 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 FAM189BP81408 668 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 C2CD6Q53TS8 623 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 C3orf58Q8NDZ4 430 aa21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 FAM124BQ9H5Z6 455 aaPredicted RBP21.64■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PODXLO00592 558 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 RRP9O43818 475 aaKnown RBP21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 FGFR1P11362 822 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GPC5P78333 572 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CLLU1OSQ5K130 101 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ANKLE1Q8NAG6 615 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TPCN2Q8NHX9 752 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 KBTBD7Q8WVZ9 684 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 NT5C1AQ9BXI3 368 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GOLPH3Q9H4A6 298 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 L2HGDHQ9H9P8 463 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 L1RE1Q9UN81 338 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 COG5Q9UP83 839 aa21.63■■□□□ 1.05
TNFRSF1A-205ENST00000534885 HCRTO43612 131 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 NSFP46459 744 aaKnown RBP21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GRIK3Q13003 919 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TTC39CQ8N584 583 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 SEPT8Q92599 483 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ZNF653Q96CK0 615 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PCDHGC3Q9UN70 934 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ENPP3O14638 875 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 UPP1Q16831 310 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 MON1BQ7L1V2 547 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LIMS2Q7Z4I7 341 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 MCOLN2Q8IZK6 566 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 HEXIM2Q96MH2 286 aaKnown RBP21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 C11orf49Q9H6J7 331 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TBX21Q9UL17 535 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 JRKLQ9Y4A0 524 aa21.62■■□□□ 1.05
TNFRSF1A-205ENST00000534885 INPPL1O15357 1258 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 FTCDO95954 541 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LRRC26Q2I0M4 334 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GLB1LQ6UWU2 654 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 C12orf29Q8N999 325 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LRRC57Q8N9N7 239 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 C1orf131Q8NDD1 294 aaKnown RBP21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 APPL2Q8NEU8 664 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 OR6B3Q8NGW1 331 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GTF3C4Q9UKN8 822 aa21.61■■□□□ 1.05
TNFRSF1A-205ENST00000534885 HUS1O60921 280 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 AMPD2Q01433 879 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 IFI16Q16666 785 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 DENND1BQ6P3S1 775 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 DPH6Q7L8W6 267 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 ACOT1Q86TX2 421 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 RHOT2Q8IXI1 618 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 WDTC1Q8N5D0 677 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 C11orf70Q9BRQ4 267 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CTTNBP2NLQ9P2B4 639 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 MRFAP1Q9Y605 127 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 MED7O43513 233 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 NCK2O43639 380 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LSM8O95777 96 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CYP1A2P05177 515 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LMO2P25791 158 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 RPL9P32969 192 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TUSC3Q13454 348 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 GLIPR1L2Q4G1C9 344 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 LLGL2Q6P1M3 1020 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 DEFB128Q7Z7B8 93 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 PDCL2Q8N4E4 241 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 DPEP3Q9H4B8 488 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 TMEM161AQ9NX61 479 aa21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CNOT8Q9UFF9 292 aaKnown RBP21.6■■□□□ 1.05
TNFRSF1A-205ENST00000534885 A8MXQ7 604 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 O00370 1275 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CYB561D2O14569 222 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 B4GALT3O60512 393 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 CXCL10P02778 98 aa21.59■■□□□ 1.05
TNFRSF1A-205ENST00000534885 VDRP11473 427 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms