RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CAGE1Q8TC20 777 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 HOOK2Q96ED9 719 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 BOD1Q96IK1 185 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 PHACTR3Q96KR7 559 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 FAM167AQ96KS9 214 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 PNKPQ96T60 521 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 ADAM2Q99965 735 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 TEX101Q9BY14 249 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 RNF181Q9P0P0 153 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 PNMA8BQ9ULN7 279 aaPredicted RBP4.49□□□□□ -1.69
USP48-215ENST00000534705 NEU2Q9Y3R4 380 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 ARHGEF40Q8TER5 1519 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 FER1L4A9Z1Z3 1794 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 ABCA6Q8N139 1617 aa4.49□□□□□ -1.69
USP48-215ENST00000534705 ABCC1P33527 1531 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 PIPSLA2A3N6 862 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 CDHR4A6H8M9 788 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 LPXNO60711 386 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 FOSP01100 380 aaPredicted RBP4.48□□□□□ -1.69
USP48-215ENST00000534705 ELANEP08246 267 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 POU2F2P09086 479 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 PDCP20941 246 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 MALP21145 153 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 CYP2C19P33261 490 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 ZNF280AP59817 542 aaPredicted RBP4.48□□□□□ -1.69
USP48-215ENST00000534705 CXADRP78310 365 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 SPDYE7PQ495Y7 208 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 ABHD17BQ5VST6 288 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 SLC4A10Q6U841 1118 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 PDSS2Q86YH6 399 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 AOPEPQ8N6M6 819 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 C3orf20Q8ND61 904 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 ANKS1AQ92625 1134 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 RAB24Q969Q5 203 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 RGMAQ96B86 450 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 KRTAP1-5Q9BYS1 174 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 GSTO2Q9H4Y5 243 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 WDCPQ9H6R7 721 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 GALNT9Q9HCQ5 603 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 AASDHPPTQ9NRN7 309 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 GNL3LQ9NVN8 582 aaKnown RBP4.48□□□□□ -1.69
USP48-215ENST00000534705 FANCAO15360 1455 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 CROCC2H7BZ55 1655 aa4.48□□□□□ -1.69
USP48-215ENST00000534705 PLCH2O75038 1416 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 EHBP1L1Q8N3D4 1523 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 RFPL1O75677 317 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 PRSS23O95084 383 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 SPDEFO95238 335 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 GPANK1O95872 356 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 NOMO3P69849 1222 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 NHLH1Q02575 133 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 FOXF2Q12947 444 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 RESTQ13127 1097 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 NOGQ13253 232 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 NOMO2Q5JPE7 1267 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 FOXR2Q6PJQ5 311 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 SRRM1Q8IYB3 904 aaKnown RBP4.47□□□□□ -1.69
USP48-215ENST00000534705 TBC1D15Q8TC07 691 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 AIFM3Q96NN9 605 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 ZSWIM1Q9BR11 485 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 ALOXE3Q9BYJ1 711 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 RHOBTB2Q9BYZ6 727 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 KMT5AQ9NQR1 393 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 NOX1Q9Y5S8 564 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 HECW2Q9P2P5 1572 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 DIP2CQ9Y2E4 1556 aa4.47□□□□□ -1.69
USP48-215ENST00000534705 RIMS1Q86UR5 1692 aaKnown RBP4.47□□□□□ -1.69
USP48-215ENST00000534705 AKNAQ7Z591 1439 aa4.46□□□□□ -1.69
USP48-215ENST00000534705 ARHGEF12Q9NZN5 1544 aa4.46□□□□□ -1.69
USP48-215ENST00000534705 MADDQ8WXG6 1647 aa4.46□□□□□ -1.69
USP48-215ENST00000534705 SETD1BQ9UPS6 1966 aaKnown RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 INO80Q9ULG1 1556 aaPredicted RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 ADGRL1O94910 1474 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 A0A1W2PS29 197 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 F2RL2O00254 374 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 AKAP10O43572 662 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 ERN1O75460 977 aaKnown RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 CHEK2O96017 543 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 SBK3P0C264 359 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 PF4V1P10720 104 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 EGR2P11161 476 aaPredicted RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 FCER1AP12319 257 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 FDXRP22570 491 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 VAV2P52735 878 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 HK3P52790 923 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 POU6F2P78424 691 aaPredicted RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 SCAPQ12770 1279 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 SNAPC2Q13487 334 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 PGS1Q32NB8 556 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 PLEKHG6Q3KR16 790 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 KHDC1Q4VXA5 237 aaKnown RBP4.46□□□□□ -1.7
USP48-215ENST00000534705 ATAT1Q5SQI0 421 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 ODR4Q5SWX8 454 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 FAM90A1Q86YD7 464 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 C9orf106Q8NAJ2 232 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 HPS3Q969F9 1004 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 MVB12AQ96EY5 273 aa4.46□□□□□ -1.7
USP48-215ENST00000534705 GTPBP4Q9BZE4 634 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms