RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TRIM25Q14258 630 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 DLGAP5Q15398 846 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 FAM110CQ1W6H9 321 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 MINDY4Q4G0A6 757 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 AMOTQ4VCS5 1084 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 PRAMEF9Q5VWM5 478 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 KIAA1841Q6NSI8 718 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 B3GNT9Q6UX72 402 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 LIPIQ6XZB0 460 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 CCDC105Q8IYK2 499 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 SSH1Q8WYL5 1049 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC39A13Q96H72 371 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 FAM84BQ96KN1 310 aaPredicted RBP5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 LRGUKQ96M69 825 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 WRNIP1Q96S55 665 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 WNT8AQ9H1J5 351 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 TERF2IPQ9NYB0 399 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 TBX21Q9UL17 535 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 NUMBLQ9Y6R0 609 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 TLN1Q9Y490 2541 aaKnown RBP5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 SPG11Q96JI7 2443 aa5.55□□□□□ -1.52
ECHDC1-223ENST00000534442 MYO3BQ8WXR4 1341 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 OR14I1A6ND48 311 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 LOC730098B7Z3J9 87 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 PYCARD-AS1I3L0S3 204 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 HYAL3O43820 417 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 NDUFS2O75306 463 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 MAFO75444 373 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 UFL1O94874 794 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ARP10275 920 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ADKP55263 362 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 PFKPQ01813 784 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ROM1Q03395 351 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 UBE4AQ14139 1066 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 NOLC1Q14978 699 aaKnown RBP eCLIP5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 MUM1Q2TAK8 710 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 SLFN12LQ6IEE8 588 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ZC3H14Q6PJT7 736 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC4A10Q6U841 1118 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ZFPM1Q8IX07 1006 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 TSPEARQ8WU66 669 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ALG3Q92685 438 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 RAX2Q96IS3 184 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 MPHOSPH9Q99550 1183 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 SLC6A17Q9H1V8 727 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 CHST12Q9NRB3 414 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 ARHGAP28Q9P2N2 729 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 SERPINB13Q9UIV8 391 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 TICRRQ7Z2Z1 1910 aa5.54□□□□□ -1.52
ECHDC1-223ENST00000534442 PCNX1Q96RV3 2341 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 ANKRD36CQ5JPF3 1778 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 MYL1P05976 194 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 CELA3BP08861 270 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 ENO2P09104 434 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 AKAP5P24588 427 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 LGALS4P56470 323 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 GALEQ14376 348 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 GBX1Q14549 363 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 GRM3Q14832 879 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 ANO1Q5XXA6 986 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 AUTS2Q8WXX7 1259 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 PMM1Q92871 262 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 TEPSINQ96N21 525 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 GALNT8Q9NY28 637 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 DPP7Q9UHL4 492 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 MTUS1Q9ULD2 1270 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 DENND2AQ9ULE3 1009 aa5.53□□□□□ -1.52
ECHDC1-223ENST00000534442 AP1G1O43747 822 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 C8BP07358 591 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 POU2F2P09086 479 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 MTHFD2P13995 350 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 TGM1P22735 817 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 ICAM3P32942 547 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 MMP14P50281 582 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 CLCN5P51795 746 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 TMEM62Q0P6H9 643 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 SMAD4Q13485 552 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 LRP8Q14114 963 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 ZNF267Q14586 743 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 IFIT1BQ5T764 474 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 KSR2Q6VAB6 950 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 CBLL1Q75N03 491 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 ANKRD33Q7Z3H0 272 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 TMC6Q7Z403 805 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 IRF2BP1Q8IU81 584 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 PPM1NQ8N819 430 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 SLC35G2Q8TBE7 412 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 IGDCC4Q8TDY8 1250 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 SOCS4Q8WXH5 440 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 RIN2Q8WYP3 895 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 TAAR9Q96RI9 348 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 SYT3Q9BQG1 590 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 PCGF6Q9BYE7 350 aa5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-223ENST00000534442 CSRNP2Q9H175 543 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms