RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CACTINQ8WUQ7 758 aaKnown RBP9.62□□□□□ -0.87
COPB1-211ENST00000534234 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
COPB1-211ENST00000534234 DNASE1L2Q92874 299 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 SNX21Q969T3 373 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 PSMG2Q969U7 264 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 E2F7Q96AV8 911 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 CBWD1Q9BRT8 395 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 LRRC27Q9C0I9 530 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 ZCWPW1Q9H0M4 648 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 ATXN3LQ9H3M9 355 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 SEMA4AQ9H3S1 761 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 PCIF1Q9H4Z3 704 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 TMEM206Q9H813 350 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 TRPV4Q9HBA0 871 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 ZNF334Q9HCZ1 680 aaPredicted RBP9.62□□□□□ -0.87
COPB1-211ENST00000534234 SPATA6Q9NWH7 488 aaPredicted RBP9.62□□□□□ -0.87
COPB1-211ENST00000534234 AGAP1Q9UPQ3 857 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 MRPS17Q9Y2R5 130 aaKnown RBP9.62□□□□□ -0.87
COPB1-211ENST00000534234 R4GN57 208 aa9.62□□□□□ -0.87
COPB1-211ENST00000534234 MTCL1Q9Y4B5 1905 aaKnown RBP9.61□□□□□ -0.87
COPB1-211ENST00000534234 HEPACAM2A8MVW5 462 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 ZNF263O14978 683 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 LAMTOR5O43504 91 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 EXTL3O43909 919 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 SP9P0CG40 484 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 TARSP26639 723 aaKnown RBP9.61□□□□□ -0.87
COPB1-211ENST00000534234 PNPLA4P41247 253 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 WNT7BP56706 349 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 AMPD3Q01432 767 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 TAF12Q16514 161 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 MGAT5BQ3V5L5 792 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 STXBP4Q6ZWJ1 553 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 GAREM2Q75VX8 874 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 ITIH5Q86UX2 942 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 LRRTM3Q86VH5 581 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 TMC8Q8IU68 726 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 ARID3BQ8IVW6 561 aaPredicted RBP9.61□□□□□ -0.87
COPB1-211ENST00000534234 DCP1BQ8IZD4 617 aaKnown RBP9.61□□□□□ -0.87
COPB1-211ENST00000534234 ADSSL1Q8N142 457 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 CSGALNACT2Q8N6G5 542 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 DEPDC1BQ8WUY9 529 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 CLDN23Q96B33 292 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 ZNF560Q96MR9 790 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 SEPT5Q99719 369 aaPredicted RBP9.61□□□□□ -0.87
COPB1-211ENST00000534234 TNMDQ9H2S6 317 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 TRPV5Q9NQA5 729 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 KBTBD4Q9NVX7 518 aa9.61□□□□□ -0.87
COPB1-211ENST00000534234 RBAKQ9NYW8 714 aaPredicted RBP9.61□□□□□ -0.87
COPB1-211ENST00000534234 SHISA7A6NL88 538 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 MAN2B1O00754 1011 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 CUTAO60888 179 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 YEATS4O95619 227 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 FGF19O95750 216 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 LMNAP02545 664 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 ITGB3P05106 788 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 HSP90AA1P07900 732 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 PDIA4P13667 645 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 GABRR2P28476 465 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 POLR2BP30876 1174 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 MAGEA9P43362 315 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 SMARCB1Q12824 385 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 FZD5Q13467 585 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 VEPH1Q14D04 833 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 E2F4Q16254 413 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 STXBP5Q5T5C0 1151 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 ZC3H14Q6PJT7 736 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 YAF2Q8IY57 180 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 MAML2Q8IZL2 1156 aaPredicted RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 GPD1LQ8N335 351 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 IQUBQ8NA54 791 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 GLIS3Q8NEA6 775 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 SPPL2BQ8TCT7 592 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 C2orf15Q8WU43 125 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 HPS3Q969F9 1004 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 DHX58Q96C10 678 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 TRIM9Q9C026 710 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 CUEDC2Q9H467 287 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 PDE11AQ9HCR9 933 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 NDRG2Q9UN36 371 aaKnown RBP9.6□□□□□ -0.87
COPB1-211ENST00000534234 DOCK8Q8NF50 2099 aa9.6□□□□□ -0.87
COPB1-211ENST00000534234 DPYSL4O14531 572 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 KIAA0391O15091 583 aaKnown RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 HUS1O60921 280 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 KRT19P08727 400 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 ZSCAN22P10073 491 aaPredicted RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 HAPLN1P10915 354 aaPredicted RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 ATF6P18850 670 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 RPS9P46781 194 aaKnown RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 RBP5P82980 135 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 TSPY1Q01534 308 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 CSTF1Q05048 431 aaKnown RBP9.59□□□□□ -0.87
COPB1-211ENST00000534234 ARHGAP15Q53QZ3 475 aa9.59□□□□□ -0.87
COPB1-211ENST00000534234 GPR158Q5T848 1215 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms