RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CYP11A1P05108 521 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 PTPN2P17706 415 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 GARTP22102 1010 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
SSBP3-215ENST00000533946 BFSP1Q12934 665 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 GPR17Q13304 367 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 KMT5BQ4FZB7 885 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.74
SSBP3-215ENST00000533946 SLFN12LQ6IEE8 588 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 ARMCX5Q6P1M9 558 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 CNNM4Q6P4Q7 775 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 PDXDC1Q6P996 788 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 GAREM2Q75VX8 874 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 CSGALNACT2Q8N6G5 542 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 IQUBQ8NA54 791 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 APPL2Q8NEU8 664 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 PKMYT1Q99640 499 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 ZCWPW1Q9H0M4 648 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.4□□□□□ -0.747e-7■■■■■ 135
SSBP3-215ENST00000533946 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.4□□□□□ -0.744e-13■■■■■ 30.7
SSBP3-215ENST00000533946 IGSF9Q9P2J2 1179 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 KCNG1Q9UIX4 513 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 MAPK8IP1Q9UQF2 711 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 DERAQ9Y315 318 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 C2CD2Q9Y426 696 aa10.4□□□□□ -0.74
SSBP3-215ENST00000533946 OBSL1O75147 1896 aa10.4□□□□□ -0.75
SSBP3-215ENST00000533946 ZNF292O60281 2723 aa10.4□□□□□ -0.75
SSBP3-215ENST00000533946 DENND4CQ5VZ89 1909 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 MYBPHLA2RUH7 354 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 KPNA7A9QM74 516 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 XYLBO75191 536 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 SRFP11831 508 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TYMPP19971 482 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 ELF1P32519 619 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TAF6P49848 677 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 CACNA2D1P54289 1103 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 DLG4P78352 724 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 CYP4F8P98187 520 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 SOWAHAQ2M3V2 549 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TPGS2Q68CL5 300 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 VITQ6UXI7 678 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 CYP26C1Q6V0L0 522 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 UNC13DQ70J99 1090 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 USP37Q86T82 979 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TMEM150AQ86TG1 271 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 SUGP1Q8IWZ8 645 aaKnown RBP10.39□□□□□ -0.75
SSBP3-215ENST00000533946 SMYD4Q8IYR2 804 aaPredicted RBP10.39□□□□□ -0.75
SSBP3-215ENST00000533946 GPD1LQ8N335 351 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TTC8Q8TAM2 541 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 KCNG4Q8TDN1 519 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 KBTBD7Q8WVZ9 684 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 CCDC127Q96BQ5 260 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 ZFYVE19Q96K21 471 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 MRPL45Q9BRJ2 306 aaKnown RBP10.39□□□□□ -0.75
SSBP3-215ENST00000533946 PI4K2AQ9BTU6 479 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TBC1D17Q9HA65 648 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 TMEM30AQ9NV96 361 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 INTS13Q9NVM9 706 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 FBXL21Q9UKT6 434 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 F5P12259 2224 aa10.39□□□□□ -0.75
SSBP3-215ENST00000533946 IL18RAPO95256 599 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 PRAMEF12O95522 483 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 KRT19P08727 400 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 POU2F2P09086 479 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 SLFN14P0C7P3 912 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
SSBP3-215ENST00000533946 ODC1P11926 461 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 CMA1P23946 247 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 CYP2F1P24903 491 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 SOX9P48436 509 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 EPHA5P54756 1037 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 PSMC1P62191 440 aaKnown RBP10.38□□□□□ -0.75
SSBP3-215ENST00000533946 FZD5Q13467 585 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 POSTNQ15063 836 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 KYAT1Q16773 422 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 DDR2Q16832 855 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 DNAJB7Q7Z6W7 309 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-215ENST00000533946 CD302Q8IX05 232 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 FSIP1Q8NA03 581 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 EEF2KMTQ96G04 330 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 SPATA32Q96LK8 384 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 ASB16Q96NS5 453 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 SEPT5Q99719 369 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-215ENST00000533946 SDCBP2Q9H190 292 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 KCTD10Q9H3F6 313 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 DPEP3Q9H4B8 488 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 CRTAC1Q9NQ79 661 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 HEBP1Q9NRV9 189 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 ABI2Q9NYB9 513 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-215ENST00000533946 DPP7Q9UHL4 492 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 GTF3C4Q9UKN8 822 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 SNX9Q9Y5X1 595 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 GREB1Q4ZG55 1949 aa10.38□□□□□ -0.75
SSBP3-215ENST00000533946 DNAH14Q0VDD8 3507 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 PTPRDP23468 1912 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ATG2BQ96BY7 2078 aa10.37□□□□□ -0.75
SSBP3-215ENST00000533946 ANTXRLA6NF34 631 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms