RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 ZNF513Q8N8E2 541 aaPredicted RBP11.63□□□□□ -0.55
CSDE1-215ENST00000533818 FANCBQ8NB91 859 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 UROC1Q96N76 676 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 TRIM4Q9C037 500 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 BARHL2Q9NY43 387 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 AK5Q9Y6K8 562 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 PCDH15Q96QU1 1955 aa11.63□□□□□ -0.55
CSDE1-215ENST00000533818 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 SYN3O14994 580 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 PSMD10O75832 226 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 HNRNPLP14866 589 aaKnown RBP eCLIP11.62□□□□□ -0.555e-8■□□□□ 8.7
CSDE1-215ENST00000533818 CPB1P15086 417 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 POU5F1BQ06416 359 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 EMC2Q15006 297 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 PDGFRLQ15198 375 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 C4orf17Q53FE4 359 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 DNAJB7Q7Z6W7 309 aaPredicted RBP11.62□□□□□ -0.55
CSDE1-215ENST00000533818 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 CPA6Q8N4T0 437 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 EXOC6Q8TAG9 804 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 RHBDD1Q8TEB9 315 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 HMGB4Q8WW32 186 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 CCDC136Q96JN2 1154 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 SLC46A2Q9BY10 475 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 PPME1Q9Y570 386 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 TAF6LQ9Y6J9 622 aa11.62□□□□□ -0.55
CSDE1-215ENST00000533818 V9GY48 417 aaPredicted RBP11.62□□□□□ -0.55
CSDE1-215ENST00000533818 COL5A1P20908 1838 aaPredicted RBP11.62□□□□□ -0.55
CSDE1-215ENST00000533818 TNRC6BQ9UPQ9 1833 aaKnown RBP11.61□□□□□ -0.55
CSDE1-215ENST00000533818 hCG_1984214I3L0E3 225 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 HIP1O00291 1037 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 KRT10P13645 584 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 CYP4F8P98187 520 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 CCDC173Q0VFZ6 552 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 DUSP4Q13115 394 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 GLRA4Q5JXX5 417 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 ZNF280DQ6N043 979 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 CASC1Q6TDU7 716 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 SLC36A4Q6YBV0 504 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 ZNF574Q6ZN55 896 aaPredicted RBP11.61□□□□□ -0.55
CSDE1-215ENST00000533818 ZNF713Q8N859 430 aaPredicted RBP11.61□□□□□ -0.55
CSDE1-215ENST00000533818 SNIP1Q8TAD8 396 aaKnown RBP11.61□□□□□ -0.55
CSDE1-215ENST00000533818 BAHD1Q8TBE0 780 aaPredicted RBP11.61□□□□□ -0.55
CSDE1-215ENST00000533818 MED8Q96G25 268 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 ZDHHC5Q9C0B5 715 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 FAM124BQ9H5Z6 455 aaPredicted RBP11.61□□□□□ -0.55
CSDE1-215ENST00000533818 ECT2Q9H8V3 914 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 GOLGA2P5Q9HBQ8 144 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 CCL26Q9Y258 94 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 ASB3Q9Y575 518 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
CSDE1-215ENST00000533818 FLNCQ14315 2725 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 MUC22E2RYF6 1773 aaPredicted RBP11.6□□□□□ -0.55
CSDE1-215ENST00000533818 ANTXRLA6NF34 631 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 K7EQS6 105 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 ADAMTS3O15072 1205 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 MARCH6O60337 910 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 BFSP1Q12934 665 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 GRIK2Q13002 908 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 C6orf118Q5T5N4 469 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 TMPRSS12Q86WS5 348 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 SPACA3Q8IXA5 215 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 MB21D2Q8IYB1 491 aaPredicted RBP11.6□□□□□ -0.55
CSDE1-215ENST00000533818 RGL4Q8IZJ4 473 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 REXO1Q8N1G1 1221 aaKnown RBP11.6□□□□□ -0.55
CSDE1-215ENST00000533818 FGF11Q92914 225 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 PSMG2Q969U7 264 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 PGLYRP2Q96PD5 576 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 PPP1R10Q96QC0 940 aaKnown RBP11.6□□□□□ -0.55
CSDE1-215ENST00000533818 GDAQ9Y2T3 454 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 HEMK1Q9Y5R4 338 aaPredicted RBP11.6□□□□□ -0.55
CSDE1-215ENST00000533818 CNTNAP5Q8WYK1 1306 aa11.6□□□□□ -0.55
CSDE1-215ENST00000533818 PRC1O43663 620 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 DKC1O60832 514 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSDE1-215ENST00000533818 GNSP15586 552 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 AVPR1AP37288 418 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 QARSP47897 775 aaKnown RBP11.59□□□□□ -0.55
CSDE1-215ENST00000533818 CAPSQ13938 189 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 DHRS13Q6UX07 377 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 B3GNT9Q6UX72 402 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 NOSTRINQ8IVI9 506 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 SLC41A1Q8IVJ1 513 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 TRIML1Q8N9V2 468 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 BEST2Q8NFU1 509 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 USP13Q92995 863 aaPredicted RBP11.59□□□□□ -0.55
CSDE1-215ENST00000533818 HSPA12BQ96MM6 686 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 GCNAQ96QF7 691 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 MTRQ99707 1265 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 CRISPLD1Q9H336 500 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 IL21RQ9HBE5 538 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 TM7SF3Q9NS93 570 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 SUSD2Q9UGT4 822 aa11.59□□□□□ -0.55
CSDE1-215ENST00000533818 SLC27A5Q9Y2P5 690 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms