RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 GABRDO14764 452 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 NCK2O43639 380 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 TBC1D4O60343 1298 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 CLASP2O75122 1294 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 LRRN2O75325 713 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 WEE2P0C1S8 567 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 RPL17P18621 184 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 WARSP23381 471 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 OR1D2P34982 312 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 NRIP1P48552 1158 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 CDH8P55286 799 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 ARPP19P56211 112 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 LRMPQ12912 555 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 RAB33AQ14088 237 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 DUSP6Q16828 381 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 FILIP1LQ4L180 1135 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 FKBP15Q5T1M5 1219 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 SLC8B1Q6J4K2 584 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 LIMS2Q7Z4I7 341 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 PALB2Q86YC2 1186 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 OR6B3Q8NGW1 331 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 LMO3Q8TAP4 145 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 TATDN2Q93075 761 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 NT5C1BQ96P26 610 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 MRPL45Q9BRJ2 306 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 CRACR2AQ9BSW2 395 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 NIF3L1Q9GZT8 377 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 INTS2Q9H0H0 1204 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 FBXL5Q9UKA1 691 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 CDY1Q9Y6F8 540 aa12.03□□□□□ -0.48
TRAPPC4-211ENST00000533012 ANK1P16157 1881 aa12.02□□□□□ -0.48
TRAPPC4-211ENST00000533012 TRIP11Q15643 1979 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 SZT2Q5T011 3432 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 C1RP00736 705 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 SERPINC1P01008 464 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 TBXAS1P24557 533 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 PON1P27169 355 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 PCSK1P29120 753 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 ASPAP45381 313 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 MRE11P49959 708 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 TSPY1Q01534 308 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 UBXN1Q04323 297 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 HYAL1Q12794 435 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 CCDC85BQ15834 202 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 RSPO2Q6UXX9 243 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 SCARA5Q6ZMJ2 495 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 TTC39CQ8N584 583 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 RNF214Q8ND24 703 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 ANP32BQ92688 251 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 DNAI2Q9GZS0 605 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 GCNT4Q9P109 453 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 DPP7Q9UHL4 492 aa12.02□□□□□ -0.49
TRAPPC4-211ENST00000533012 LGALS16A8MUM7 142 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 A8MXQ7 604 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 ADAM12O43184 909 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 GLUD1P00367 558 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 PDGFRBP09619 1106 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 CPB1P15086 417 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 SLC9A1P19634 815 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 LMO2P25791 158 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 ELF1P32519 619 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 RAP1GAPP47736 663 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 CLCN4P51793 760 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 YWHAEP62258 255 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 CUL2Q13617 745 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 SKIV2LQ15477 1246 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 TPGS2Q68CL5 300 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 ELMSAN1Q6PJG2 1045 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 UNC93AQ86WB7 457 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 DCP1BQ8IZD4 617 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 PPM1KQ8N3J5 372 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 EFHBQ8N7U6 833 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 ZNF461Q8TAF7 563 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 KBTBD7Q8WVZ9 684 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 PPM1EQ8WY54 764 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 FAM81BQ96LP2 452 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 RTP3Q9BQQ7 232 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 BCO2Q9BYV7 579 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 ZCWPW1Q9H0M4 648 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 SDCBP2Q9H190 292 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 FAM124BQ9H5Z6 455 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 SMYD3Q9H7B4 428 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 UBE2TQ9NPD8 197 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 CDH9Q9ULB4 789 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 MAFFQ9ULX9 164 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 BARX2Q9UMQ3 279 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 STXBP5LQ9Y2K9 1186 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 KIAA1671Q9BY89 1806 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 NLRC5Q86WI3 1866 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 CDH23Q9H251 3354 aa12.01□□□□□ -0.49
TRAPPC4-211ENST00000533012 PDCD11Q14690 1871 aaKnown RBP12□□□□□ -0.49
TRAPPC4-211ENST00000533012 TGM5O43548 720 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms