RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LVRNQ6Q4G3 990 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 BEND5Q7L4P6 421 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 GPRIN1Q7Z2K8 1008 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 PPP1R32Q7Z5V6 425 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 ZNF354CQ86Y25 554 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 SUGP1Q8IWZ8 645 aaKnown RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 KBTBD2Q8IY47 623 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 DNAJC5GQ8N7S2 189 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 VGLL2Q8N8G2 317 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 GLIS1Q8NBF1 620 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 SHCBP1Q8NEM2 672 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 GCC1Q96CN9 775 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 LCORQ96JN0 433 aaPredicted RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 KLHL32Q96NJ5 620 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 DPYSL5Q9BPU6 564 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 OBP2BQ9NPH6 170 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 C9orf78Q9NZ63 289 aaPredicted RBP3.57□□□□□ -1.84
CD44-234ENST00000531873 PGAP2Q9UHJ9 254 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 MID2Q9UJV3 735 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 MYRFQ9Y2G1 1151 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 PLEKHM1Q9Y4G2 1056 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 PAXBP1Q9Y5B6 917 aa3.57□□□□□ -1.84
CD44-234ENST00000531873 A0A1W2PRX2 142 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 MROH6A6NGR9 719 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 AQP12BA6NM10 295 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 RFXAPO00287 272 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 PODXLO00592 558 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 TRIM38O00635 465 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 AREL1O15033 823 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 THAP12O43422 761 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 AGFG2O95081 481 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 PRSS23O95084 383 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 ANXA1P04083 346 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 A1BGP04217 495 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 GNAI2P04899 355 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 GRPP07492 148 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 MYL4P12829 197 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 FDXRP22570 491 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 SERPINF1P36955 418 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 POU6F2P78424 691 aaPredicted RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 SLFN5Q08AF3 891 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 POSTNQ15063 836 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 RAB30Q15771 203 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 ZNF568Q3ZCX4 644 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 PRR16Q569H4 304 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 ZFYVE27Q5T4F4 411 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 UTP14CQ5TAP6 766 aaKnown RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 JMJD6Q6NYC1 403 aaPredicted RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 ZDHHC24Q6UX98 284 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 DOK3Q7L591 496 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 USP37Q86T82 979 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 MPP5Q8N3R9 675 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 SLC15A4Q8N697 577 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 LINC01356Q8N9X3 169 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 ATG16L2Q8NAA4 619 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 RNF169Q8NCN4 708 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 DNERQ8NFT8 737 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 NLGN4YQ8NFZ3 816 aaPredicted RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 IPO4Q8TEX9 1081 aaKnown RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 ZNF384Q8TF68 577 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 TRAPPC12Q8WVT3 735 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 SCAMP4Q969E2 229 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 MUL1Q969V5 352 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 TBC1D20Q96BZ9 403 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 NEIL1Q96FI4 390 aaPredicted RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 LRRC46Q96FV0 321 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 ZNF512Q96ME7 567 aaPredicted RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 NAP1L4Q99733 375 aaKnown RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 TCF25Q9BQ70 676 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 HEPHQ9BQS7 1158 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 SPATA5L1Q9BVQ7 753 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 STK31Q9BXU1 1019 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 CPEB1Q9BZB8 566 aaKnown RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 GSTO2Q9H4Y5 243 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 A1CFQ9NQ94 594 aaKnown RBP3.56□□□□□ -1.84
CD44-234ENST00000531873 TM7SF3Q9NS93 570 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 DACT1Q9NYF0 836 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 IGSF9Q9P2J2 1179 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 ZNF212Q9UDV6 495 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 OAZ3Q9UMX2 235 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 TBC1D30Q9Y2I9 924 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 CEP83Q9Y592 693 aa3.56□□□□□ -1.84
CD44-234ENST00000531873 TBKBP1A7MCY6 615 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 HNRNPDLO14979 420 aaKnown RBP3.55□□□□□ -1.84
CD44-234ENST00000531873 KIF20AO95235 890 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 TNFRSF6BO95407 300 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 AGR2O95994 175 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 POMCP01189 267 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 ALAS1P13196 640 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 HSD3B1P14060 373 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 IL1R2P27930 398 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 TOB1P50616 345 aaPredicted RBP3.55□□□□□ -1.84
CD44-234ENST00000531873 AFF3P51826 1226 aaKnown RBP3.55□□□□□ -1.84
CD44-234ENST00000531873 ITGA8P53708 1063 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 RAC3P60763 192 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 FOXO1Q12778 655 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 PPFIA1Q13136 1202 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 SPARCL1Q14515 664 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 UBXN2BQ14CS0 331 aa3.55□□□□□ -1.84
CD44-234ENST00000531873 VMACQ2NL98 169 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms