RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551		A8MXQ7	604 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	RNF225	M0QZC1	329 aa	Predicted RBP	18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	FOXN3	O00409	490 aa	Predicted RBP	18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	SYN3	O14994	580 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	HCRT	O43612	131 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	TACC1	O75410	805 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	SOD2	P04179	222 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	FXR1	P51114	621 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	NDST1	P52848	882 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	SMAD3	P84022	425 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	PLCB3	Q01970	1234 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	RTP2	Q5QGT7	225 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	DDX53	Q86TM3	631 aa	Known RBP	18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	OSTM1	Q86WC4	334 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	SAMD11	Q96NU1	681 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	TTPAL	Q9BTX7	342 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	CAPN11	Q9UMQ6	739 aa		18.86	■□□□□ 0.61
CTSB-222	ENST00000531551	LRRC53	A6NM62	1247 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551		F8VZ95	297 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	TYMP	P19971	482 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	ACO1	P21399	889 aa	Known RBP	18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	ACAT1	P24752	427 aa	Known RBP	18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	LMO2	P25791	158 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	ERVK-21	P61565	698 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	ARID5A	Q03989	594 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	VARS2	Q5ST30	1063 aa	Known RBP	18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	PRPF38B	Q5VTL8	546 aa	Known RBP	18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	THEM5	Q8N1Q8	247 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	FBXO22	Q8NEZ5	403 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	IQCD	Q96DY2	449 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	C11orf84	Q9BUA3	381 aa	Predicted RBP	18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	HMGXB4	Q9UGU5	601 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.85	■□□□□ 0.61
CTSB-222	ENST00000531551	DAAM1	Q9Y4D1	1078 aa		18.85	■□□□□ 0.61
CTSB-222	ENST00000531551		A0A1W2PQJ5	194 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	CYP11A1	P05108	521 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	RB1	P06400	928 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	FGFR3	P22607	806 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	WARS	P23381	471 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	KRT9	P35527	623 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	STAT1	P42224	750 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	LHX1	P48742	406 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	ADK	P55263	362 aa	Known RBP	18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	LIMS2	Q7Z4I7	341 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	RIN2	Q8WYP3	895 aa	Predicted RBP	18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	SHC3	Q92529	594 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	BAP1	Q92560	729 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	GPR88	Q9GZN0	384 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551		A0A1W2PPC1	479 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	GOLGA6L6	A8MZA4	724 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	C5orf67	F2Z3F1	127 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	CILP	O75339	1184 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	GFPT2	O94808	682 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	UROD	P06132	367 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	TBX2	Q13207	712 aa	Predicted RBP	18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	TTC39C	Q8N584	583 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	RBBP8NL	Q8NC74	664 aa	Predicted RBP	18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	POF1B	Q8WVV4	589 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	AUTS2	Q8WXX7	1259 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	JAKMIP2	Q96AA8	810 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	TWNK	Q96RR1	684 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	HERC2P3	Q9BVR0	1158 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	EDEM3	Q9BZQ6	932 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	STXBP5L	Q9Y2K9	1186 aa		18.84	■□□□□ 0.61
CTSB-222	ENST00000531551	AKR1B15	C9JRZ8	316 aa	Predicted RBP	18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	CYP26A1	O43174	497 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	EFEMP2	O95967	443 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	GLUD2	P49448	558 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	CDR1	P51861	262 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	JAM2	P57087	298 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	PSMC1	P62191	440 aa	Known RBP	18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	ZBED6	P86452	979 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	INCA1	Q0VD86	236 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	GPM6B	Q13491	265 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	CTXN3	Q4LDR2	81 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	PDXDC1	Q6P996	788 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	TMC7	Q7Z402	723 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	RNF168	Q8IYW5	571 aa	Predicted RBP	18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	UBR7	Q8N806	425 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	NT5C1A	Q9BXI3	368 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	DPEP3	Q9H4B8	488 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	NME7	Q9Y5B8	376 aa		18.83	■□□□□ 0.6
CTSB-222	ENST00000531551	GABRD	O14764	452 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	SOX5	P35711	763 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ARPP19	P56211	112 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	LRIT3	Q3SXY7	679 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ZNF280D	Q6N043	979 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ANKS3	Q6ZW76	656 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ACOT1	Q86TX2	421 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	SPPL3	Q8TCT6	385 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	MICAL1	Q8TDZ2	1067 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	WHAMM	Q8TF30	809 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ELOVL4	Q9GZR5	314 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	ENTPD7	Q9NQZ7	604 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	CHST7	Q9NS84	486 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	STK39	Q9UEW8	545 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	GRM6	O15303	877 aa		18.82	■□□□□ 0.6
CTSB-222	ENST00000531551	MFAP3L	O75121	409 aa		18.82	■□□□□ 0.6

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