RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 COQ9O75208 318 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 SKIP12755 728 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 RASSF2P50749 326 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 CACNA2D1P54289 1103 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 RCN2Q14257 317 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 SPDYAQ5MJ70 313 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 CCDC137Q6PK04 289 aaKnown RBP20.27■□□□□ 0.84
LTBP3-217ENST00000530785 CCDC60Q8IWA6 550 aaPredicted RBP20.27■□□□□ 0.84
LTBP3-217ENST00000530785 ZDHHC14Q8IZN3 488 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 SEMA4DQ92854 862 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 VTI1AQ96AJ9 217 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 SSC5DA1L4H1 1573 aa20.27■□□□□ 0.84
LTBP3-217ENST00000530785 FOXO6A8MYZ6 492 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 C19orf81C9J6K1 198 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 IMPDH2P12268 514 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 AADACL2Q6P093 401 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 PPM1KQ8N3J5 372 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 SPIRE2Q8WWL2 714 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 GATA6Q92908 595 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 PTPRN2Q92932 1015 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 KREMEN1Q96MU8 473 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 POP1Q99575 1024 aaKnown RBP20.27■□□□□ 0.83
LTBP3-217ENST00000530785 ACAD9Q9H845 621 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 AAASQ9NRG9 546 aa20.27■□□□□ 0.83
LTBP3-217ENST00000530785 LCTP09848 1927 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 MAGEB2O15479 319 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 TCEA3O75764 348 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 TJP3O95049 919 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 PSAPP07602 524 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 MCCD1P59942 119 aaPredicted RBP20.26■□□□□ 0.83
LTBP3-217ENST00000530785 MOGSQ13724 837 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 PABPC1LQ4VXU2 614 aaKnown RBP20.26■□□□□ 0.83
LTBP3-217ENST00000530785 CATSPERGQ6ZRH7 1159 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 CCDC25Q86WR0 208 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 KLRG1Q96E93 195 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 NTPCRQ9BSD7 190 aaKnown RBP20.26■□□□□ 0.83
LTBP3-217ENST00000530785 ZWILCHQ9H900 591 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 XPNPEP1Q9NQW7 623 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
LTBP3-217ENST00000530785 TMOD4Q9NZQ9 345 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 SLC9A2Q9UBY0 812 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 SEPT9Q9UHD8 586 aaPredicted RBP20.26■□□□□ 0.83
LTBP3-217ENST00000530785 MAGEA13PA6NCF6 341 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 ATP2A1O14983 1001 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 DCTN3O75935 186 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 ACSL3O95573 720 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 GGPS1O95749 300 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 PRKCEQ02156 737 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 CYP1B1Q16678 543 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 PPP1R21Q6ZMI0 780 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 EPS8L1Q8TE68 723 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 NCSTNQ92542 709 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 NKIRAS1Q9NYS0 192 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 GGA3Q9NZ52 723 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 LGALS13Q9UHV8 139 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 PHF24Q9UPV7 400 aa20.26■□□□□ 0.83
LTBP3-217ENST00000530785 CREB3O43889 395 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 SGPL1O95470 568 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 ACTR2P61160 394 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 KRT39Q6A163 491 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 RBM12BQ8IXT5 1001 aaKnown RBP20.25■□□□□ 0.83
LTBP3-217ENST00000530785 FAM71AQ8IYT1 594 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 C17orf75Q9HAS0 396 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 ACP6Q9NPH0 428 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 PDP2Q9P2J9 529 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 NFASCO94856 1347 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 SPDYE16A6NNV3 312 aaPredicted RBP20.25■□□□□ 0.83
LTBP3-217ENST00000530785 FTLP02792 175 aaPredicted RBP20.25■□□□□ 0.83
LTBP3-217ENST00000530785 MARK3P27448 753 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 KHDC1Q4VXA5 237 aaKnown RBP20.25■□□□□ 0.83
LTBP3-217ENST00000530785 SNX30Q5VWJ9 437 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 FAM47EQ6ZV65 393 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 NOP9Q86U38 636 aaKnown RBP20.25■□□□□ 0.83
LTBP3-217ENST00000530785 NRG4Q8WWG1 115 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 PDLIM7Q9NR12 457 aa20.25■□□□□ 0.83
LTBP3-217ENST00000530785 NOCTQ9UK39 431 aaKnown RBP20.25■□□□□ 0.83
LTBP3-217ENST00000530785 LOC285556D6RIA3 1793 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 SOCS7O14512 581 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 DGAT1O75907 488 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 RHOT2Q8IXI1 618 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 ZNF513Q8N8E2 541 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-217ENST00000530785 SCG3Q8WXD2 468 aaKnown RBP20.24■□□□□ 0.83
LTBP3-217ENST00000530785 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 CDHR1Q96JP9 859 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 FBXL18Q96ME1 805 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 PCDHB18PQ96TA0 734 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 TMEM8AQ9HCN3 771 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 LNPEPQ9UIQ6 1025 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 PASKQ96RG2 1323 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 MIF4GDA9UHW6 222 aaKnown RBP20.24■□□□□ 0.83
LTBP3-217ENST00000530785 HNRNPDLO14979 420 aaKnown RBP20.24■□□□□ 0.83
LTBP3-217ENST00000530785 TP73O15350 636 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 CYP26A1O43174 497 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 DKC1O60832 514 aaKnown RBP eCLIP20.24■□□□□ 0.83
LTBP3-217ENST00000530785 CHRNB2P17787 502 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 PTPN4P29074 926 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 GSTT1P30711 240 aa20.24■□□□□ 0.83
LTBP3-217ENST00000530785 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-217ENST00000530785 IL9RQ01113 521 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms