RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 H0YGN5 161 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TMEM189-UBE2V1I3L0A0 370 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 M0QZQ0 153 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ARHGAP6O43182 974 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 THAP12O43422 761 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CAPN15O75808 1086 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PLEKP08567 350 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CYP11B1P15538 503 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 LAG3P18627 525 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 WARSP23381 471 aaKnown RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 LMO2P25791 158 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 GNA15P30679 374 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CYLC1P35663 651 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PRKCIP41743 596 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 LHX1P48742 406 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 AARSP49588 968 aaKnown RBP eCLIP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ZNF132P52740 706 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RAD23BP54727 409 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 HTRA4P83105 476 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CCZ1BP86790 482 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CCZ1P86791 482 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 INCA1Q0VD86 236 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 HS1BP3Q53T59 392 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 FAM171A1Q5VUB5 890 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 HGSNATQ68CP4 663 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SMYD5Q6GMV2 418 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ZNF571Q7Z3V5 609 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ACOT1Q86TX2 421 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 NOP9Q86U38 636 aaKnown RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 UNC93AQ86WB7 457 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 OSTM1Q86WC4 334 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 COLGALT1Q8NBJ5 622 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SLC20A1Q8WUM9 679 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 KBTBD7Q8WVZ9 684 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SUSD3Q96L08 255 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TWNKQ96RR1 684 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ELOVL4Q9GZR5 314 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 FAM124BQ9H5Z6 455 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 DDX43Q9NXZ2 648 aaKnown RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SPG21Q9NZD8 308 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ARHGAP20Q9P2F6 1191 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 HMGXB4Q9UGU5 601 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 KIAA1257Q9ULG3 409 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CNTN6Q9UQ52 1028 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PCDHB12Q9Y5F1 795 aa9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 EPN1Q9Y6I3 576 aaPredicted RBP9.07□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SF3B1O75533 1304 aaKnown RBP eCLIP9.06□□□□□ -0.964e-7■■■■■ 86.2
NEDD8-MDP1-201ENST00000530579 SCN5AQ14524 2016 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SSU72P8A0A1W2PR75 194 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CARNS1A5YM72 827 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 GRXCR1A8MXD5 290 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MED7O43513 233 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 HCRTO43612 131 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PAEPP09466 180 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 VDRP11473 427 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TYMPP19971 482 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 FECHP22830 423 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ACAT1P24752 427 aaKnown RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 BRD2P25440 801 aaKnown RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TKTP29401 623 aaKnown RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RABGGTBP53611 331 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CDR2Q01850 454 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ELAVL2Q12926 359 aaKnown RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MAPK8IP2Q13387 824 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MTF1Q14872 753 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SPA17Q15506 151 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 KIAA1841Q6NSI8 718 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 FUT10Q6P4F1 479 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 RAD9BQ6WBX8 426 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ZNF677Q86XU0 584 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TMEM139Q8IV31 216 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CCDC170Q8IYT3 715 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 BCL7CQ8WUZ0 217 aaPredicted RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TMEM169Q96HH4 297 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 IGSF21Q96ID5 467 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TNIP3Q96KP6 325 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SPTLC3Q9NUV7 552 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MARCH5Q9NX47 278 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ADAMTS1Q9UHI8 967 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 STXBP5LQ9Y2K9 1186 aa9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 KIAA0100Q14667 2235 aaKnown RBP9.06□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 TMCO5BA8MYB1 307 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 H7C4K7 107 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 GABRDO14764 452 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 SYN3O14994 580 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 ATP2C2O75185 946 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 NDUFA10O95299 355 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CYP11A1P05108 521 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 MMEP08473 750 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 CHRNB2P17787 502 aa9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PTPN1P18031 435 aaKnown RBP9.05□□□□□ -0.96
NEDD8-MDP1-201ENST00000530579 PCSK1P29120 753 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms