RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 TCP10Q12799 353 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CNTN1Q12860 1018 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 NR1D2Q14995 579 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 LRRC31Q6UY01 552 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAGED4Q96JG8 741 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 KYNUQ16719 465 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 C5orf22Q49AR2 442 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CHERPQ8IWX8 916 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 APPBP2Q92624 585 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 XKR8Q9H6D3 395 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 OR6B1O95007 311 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 TRPC4APQ8TEL6 797 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 FBXO9Q9UK97 447 aaPredicted RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 MAGEA12P43365 314 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 ANKS6Q68DC2 871 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 C12orf50Q8NA57 414 aaPredicted RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 AFG1LQ8WV93 481 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 CIDECQ96AQ7 238 aaPredicted RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 SLC35C2Q9NQQ7 365 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 AOX1Q06278 1338 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 PDS5AQ29RF7 1337 aaKnown RBP13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 ABCC5O15440 1437 aa13.18□□□□□ -0.3
PDE4DIP-227ENST00000529945 PTPN6P29350 595 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 RESTQ13127 1097 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 HPS1Q92902 700 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 KMT5AQ9NQR1 393 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 VWA5AO00534 786 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 LIN7AO14910 233 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 FBLN1P23142 703 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 SERPINB5P36952 375 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 PTGDRQ13258 359 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 ZNF846Q147U1 533 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 FAM26FQ5R3K3 315 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 SLC44A2Q8IWA5 706 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 BLIDQ8IZY5 108 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 OR8H3Q8N146 312 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 PCIF1Q9H4Z3 704 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CLEC4AQ9UMR7 237 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 PPIEQ9UNP9 301 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CDY2AQ9Y6F7 541 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CDY1Q9Y6F8 540 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 FBXO11Q86XK2 927 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 DHTKD1Q96HY7 919 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 DNAJC11Q9NVH1 559 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 SMG5Q9UPR3 1016 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CDC16Q13042 620 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 KDELC2Q7Z4H8 507 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 ELMOD1Q8N336 334 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 TEX13BQ9BXU2 312 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 STX16-NPEPL1H3BU86 382 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 INO80B-WBP1J3KQ70 363 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 M0R2C6 588 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 STX16O14662 325 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 ZNF682O95780 498 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CCDC137Q6PK04 289 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 RASGRP2Q7LDG7 609 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 KBTBD2Q8IY47 623 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 INO80BQ9C086 356 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CLTBP09497 229 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 CHRNB3Q05901 458 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 PRR5LQ6MZQ0 368 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 ZCCHC8Q6NZY4 707 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 EIF2AK4Q9P2K8 1649 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 MYL12BO14950 172 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 NOS1APO75052 506 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 AADACL4Q5VUY2 407 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 TRIM65Q6PJ69 517 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 KSR2Q6VAB6 950 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 SETD3Q86TU7 594 aaPredicted RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 GPD1LQ8N335 351 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 MARCH7Q9H992 704 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 RPS6KA6Q9UK32 745 aa13.17□□□□□ -0.3
PDE4DIP-227ENST00000529945 HIST1H2AGP0C0S8 130 aaPredicted RBP13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 HIST1H2ADP20671 130 aa13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 NFYCQ13952 458 aa13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 HIST1H2AHQ96KK5 128 aa13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 HIST1H2AJQ99878 128 aa13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 H2AFJQ9BTM1 129 aa13.16□□□□□ -0.3
PDE4DIP-227ENST00000529945 POLR3EQ9NVU0 708 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms