RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 OR4Q2P0C623 313 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 CPB1P15086 417 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 SSTR3P32745 418 aaPredicted RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 VAMP7P51809 220 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 PMS1P54277 932 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 FKBP3Q00688 224 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 LRRC63Q05C16 580 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TRPC3Q13507 836 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 C1orf220Q5T0J3 134 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TDRD10Q5VZ19 366 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 INTS8Q75QN2 995 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 ZC3H3Q8IXZ2 948 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TMEM86AQ8N2M4 240 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 OR10T2Q8NGX3 314 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 SPATA18Q8TC71 538 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 RPGRIP1Q96KN7 1286 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 MKNK1Q9BUB5 465 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 ZCWPW1Q9H0M4 648 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 CLSTN2Q9H4D0 955 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 CYP4F11Q9HBI6 524 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TSC2P49815 1807 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 TTC28Q96AY4 2481 aa13.62□□□□□ -0.23
CCDC90B-216ENST00000529856 NCOR1O75376 2440 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 PRRG1O14668 218 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 VNN2O95498 520 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 POU2F2P09086 479 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 KRT13P13646 458 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 ATICP31939 592 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 MYL6P60660 151 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 BIRC3Q13489 604 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 SOWAHAQ2M3V2 549 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 ZACNQ401N2 412 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 SV2AQ7L0J3 742 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 XYLT2Q9H1B5 865 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 NR2E1Q9Y466 385 aa13.61□□□□□ -0.23
CCDC90B-216ENST00000529856 GABRDO14764 452 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 CCL16O15467 120 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 XYLBO75191 536 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 VNN1O95497 513 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 FAM163BP0C2L3 166 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 TRIM49P0CI25 452 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 TRIM49CP0CI26 452 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 LHX1P48742 406 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 NCOA4Q13772 614 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 FOXR2Q6PJQ5 311 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 LRRTM3Q86VH5 581 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 ADGRF2Q8IZF7 708 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 PGLYRP2Q96PD5 576 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 DUSP9Q99956 384 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 ACBD6Q9BR61 282 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 VRTNQ9H8Y1 702 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 DDX43Q9NXZ2 648 aaKnown RBP13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 USTQ9Y2C2 406 aa13.6□□□□□ -0.23
CCDC90B-216ENST00000529856 DOCK6Q96HP0 2047 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 DENND4AQ7Z401 1863 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 MTMR11A4FU01 709 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 SLC16A3O15427 465 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 LRG1P02750 347 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 GTF2H1P32780 548 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 TNNC1P63316 161 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 MYL7Q01449 175 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 PPP3CAQ08209 521 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 SMARCB1Q12824 385 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 DUSP4Q13115 394 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 WDR72Q3MJ13 1102 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 KLHL10Q6JEL2 608 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 TTI2Q6NXR4 508 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 GRASPQ7Z6J2 395 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 OSTM1Q86WC4 334 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 DCP1BQ8IZD4 617 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 ATAD1Q8NBU5 361 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 KBTBD7Q8WVZ9 684 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 CEP63Q96MT8 703 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 MMS19Q96T76 1030 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 NUP62CLQ9H1M0 184 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 HSFX1Q9UBD0 423 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 INSL5Q9Y5Q6 135 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 CLUHO75153 1309 aa13.59□□□□□ -0.23
CCDC90B-216ENST00000529856 BICDL2A1A5D9 508 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 C2CD4DB7Z1M9 353 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 TACC1O75410 805 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 PTPN2P17706 415 aa13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 WARSP23381 471 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 SP100P23497 879 aaPredicted RBP13.58□□□□□ -0.24
CCDC90B-216ENST00000529856 ACAT1P24752 427 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms