RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MALP21145 153 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 PROZP22891 400 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 SMARCA1P28370 1054 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 CACNB3P54284 484 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 INHBEP58166 350 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 GPSM2P81274 684 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 CYP2A13Q16696 494 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 GEN1Q17RS7 908 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 ZNF365Q70YC5 407 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 DAAM2Q86T65 1068 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 C3orf20Q8ND61 904 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 IL17RDQ8NFM7 739 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 PLBD2Q8NHP8 589 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 NACC2Q96BF6 587 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 BOD1Q96IK1 185 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 ELAC2Q9BQ52 826 aaKnown RBP5.71□□□□□ -1.5
C11orf88-204ENST00000529661 TOR3AQ9H497 397 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 TBCCD1Q9NVR7 557 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 JKAMPQ9P055 326 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 PHTF1Q9UMS5 762 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 NR2E3Q9Y5X4 410 aa5.71□□□□□ -1.5
C11orf88-204ENST00000529661 CAPN8A6NHC0 703 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 SLC43A1O75387 559 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 FTLP02792 175 aaPredicted RBP5.7□□□□□ -1.5
C11orf88-204ENST00000529661 FDXRP22570 491 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 AK2P54819 239 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 NKX6-1P78426 367 aaPredicted RBP5.7□□□□□ -1.5
C11orf88-204ENST00000529661 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 SCAPQ12770 1279 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 NOGQ13253 232 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 SNAPC2Q13487 334 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 CNN3Q15417 329 aaKnown RBP5.7□□□□□ -1.5
C11orf88-204ENST00000529661 SMN1Q16637 294 aaKnown RBP5.7□□□□□ -1.5
C11orf88-204ENST00000529661 LONRF3Q496Y0 759 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 GORABQ5T7V8 394 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 MAEAQ7L5Y9 396 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 EXOC8Q8IYI6 725 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 KRT78Q8N1N4 520 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 AOPEPQ8N6M6 819 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 RGMAQ96B86 450 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 PTCD3Q96EY7 689 aaKnown RBP5.7□□□□□ -1.5
C11orf88-204ENST00000529661 Q96MF0 132 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 KLHL32Q96NJ5 620 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 MED15Q96RN5 788 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 IMPG2Q9BZV3 1241 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 CASS4Q9NQ75 786 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 SYBUQ9NX95 663 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 PCDHA3Q9Y5H8 950 aa5.7□□□□□ -1.5
C11orf88-204ENST00000529661 EPN1Q9Y6I3 576 aaPredicted RBP5.7□□□□□ -1.5
C11orf88-204ENST00000529661 F2RL2O00254 374 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 ZFPL1O95159 310 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 ARIH2O95376 493 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 BMP5P22003 454 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 TGM1P22735 817 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 ALDH5A1P51649 535 aaPredicted RBP5.69□□□□□ -1.5
C11orf88-204ENST00000529661 VAV2P52735 878 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 SEC24CP53992 1094 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 COL10A1Q03692 680 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 TOGARAM2Q6ZUX3 1019 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 MORC1Q86VD1 984 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 COLGALT2Q8IYK4 626 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 NSUN7Q8NE18 718 aaKnown RBP5.69□□□□□ -1.5
C11orf88-204ENST00000529661 TMIEQ8NEW7 156 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 LINC00476Q8WZB0 136 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 GJA10Q969M2 543 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 TMEM125Q96AQ2 219 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 ZG16BQ96DA0 208 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 FAM167AQ96KS9 214 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 COQ10AQ96MF6 247 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 UNKLQ9H9P5 680 aaKnown RBP5.69□□□□□ -1.5
C11orf88-204ENST00000529661 SLAMF7Q9NQ25 335 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 TMEM74BQ9NUR3 256 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
C11orf88-204ENST00000529661 TRGV11A0A075B6L2 103 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 MYADML2A6NDP7 307 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 FRS3O43559 492 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 PQBP1O60828 265 aaKnown RBP5.68□□□□□ -1.5
C11orf88-204ENST00000529661 PLA2G5P39877 138 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 PSMC1P62191 440 aaKnown RBP5.68□□□□□ -1.5
C11orf88-204ENST00000529661 ZNF844Q08AG5 666 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 FOXI1Q12951 378 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 FGL2Q14314 439 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 CCDC93Q567U6 631 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 SPICE1Q8N0Z3 855 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 PARD3BQ8TEW8 1205 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 LRTOMTQ8WZ04 291 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 NUP62CLQ9H1M0 184 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 ATP6V0A4Q9HBG4 840 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 GNL3LQ9NVN8 582 aaKnown RBP5.68□□□□□ -1.5
C11orf88-204ENST00000529661 TAGLN3Q9UI15 199 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 PCDHGB6Q9Y5F9 930 aa5.68□□□□□ -1.5
C11orf88-204ENST00000529661 NT5C1B-RDH14C9J2C7 533 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 GJB1P08034 283 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 GNAI3P08754 354 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 MYF5P13349 255 aa5.67□□□□□ -1.5
C11orf88-204ENST00000529661 TYRP14679 529 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms