RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TSHZ1Q6ZSZ6 1077 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 TMPRSS9Q7Z410 1059 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 PSD4Q8NDX1 1056 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 TRIM54Q9BYV2 358 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 SMURF2Q9HAU4 748 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 KCNE5Q9UJ90 142 aa5.83□□□□□ -1.48
CTR9-204ENST00000529355 ING1Q9UK53 422 aaPredicted RBP5.83□□□□□ -1.48
CTR9-204ENST00000529355 CCDC195A0A1B0GUA6 201 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 PHGDHO43175 533 aaKnown RBP5.82□□□□□ -1.48
CTR9-204ENST00000529355 PIM1P11309 404 aaPredicted RBP5.82□□□□□ -1.48
CTR9-204ENST00000529355 KRT4P19013 534 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 TACR2P21452 398 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 PEX2P28328 305 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 HNRNPMP52272 730 aaKnown RBP eCLIP5.82□□□□□ -1.48
CTR9-204ENST00000529355 ZNF134P52741 427 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 UCP3P55916 312 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 ZXDAP98168 799 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 ZNF844Q08AG5 666 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 COBLL1Q53SF7 1204 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 C3orf38Q5JPI3 329 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 KSR2Q6VAB6 950 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 AOPEPQ8N6M6 819 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 POC1BQ8TC44 478 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 LRTOMTQ8WZ04 291 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 SMOQ99835 787 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 TTYH3Q9C0H2 523 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 SERHL2Q9H4I8 314 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 DDX21Q9NR30 783 aaKnown RBP eCLIP5.82□□□□□ -1.48
CTR9-204ENST00000529355 MED16Q9Y2X0 877 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 NOX1Q9Y5S8 564 aa5.82□□□□□ -1.48
CTR9-204ENST00000529355 BTN3A1O00481 513 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 TOR1BO14657 336 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 KIF3BO15066 747 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 PEX11BO96011 259 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 HRGP04196 525 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 GNAI2P04899 355 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 GRPP07492 148 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SLC5A1P13866 664 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 ZEB1P37275 1124 aaPredicted RBP5.81□□□□□ -1.48
CTR9-204ENST00000529355 SLC11A2P49281 568 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 TBX4P57082 545 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 POU6F2P78424 691 aaPredicted RBP5.81□□□□□ -1.48
CTR9-204ENST00000529355 GUCY1B3Q02153 619 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 TCF15Q12870 199 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 KLF10Q13118 480 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 DYRK1AQ13627 763 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 HSP90AB2PQ58FF8 381 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 DARS2Q6PI48 645 aaKnown RBP5.81□□□□□ -1.48
CTR9-204ENST00000529355 KCNV1Q6PIU1 500 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SRGAP1Q7Z6B7 1085 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 ARHGEF19Q8IW93 802 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 ADGRG5Q8IZF4 528 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 FAM43AQ8N2R8 423 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SLC15A4Q8N697 577 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 NEU4Q8WWR8 484 aaPredicted RBP5.81□□□□□ -1.48
CTR9-204ENST00000529355 BOD1Q96IK1 185 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SLC46A1Q96NT5 459 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 TMEM74BQ9NUR3 256 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 PIH1D1Q9NWS0 290 aaKnown RBP5.81□□□□□ -1.48
CTR9-204ENST00000529355 RNF181Q9P0P0 153 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SRRDQ9UH36 339 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 TPCN1Q9ULQ1 816 aa5.81□□□□□ -1.48
CTR9-204ENST00000529355 SALL3Q9BXA9 1300 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 PRAMEF33A0A0G2JMD5 474 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 F8W8V4 182 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 PRAMEF10O60809 474 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 MAP4K4O95819 1239 aaPredicted RBP5.8□□□□□ -1.48
CTR9-204ENST00000529355 FSHBP01225 129 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 HMGB1P09429 215 aaKnown RBP5.8□□□□□ -1.48
CTR9-204ENST00000529355 EGR2P11161 476 aaPredicted RBP5.8□□□□□ -1.48
CTR9-204ENST00000529355 ITGAMP11215 1152 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 MYF5P13349 255 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 PTGS2P35354 604 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 VAV2P52735 878 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 FMO1Q01740 532 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 SP2Q02086 613 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 FPGSQ05932 587 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 PPP4R4Q6NUP7 873 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 ZNF280BQ86YH2 543 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 SYNE4Q8N205 404 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.8□□□□□ -1.48
CTR9-204ENST00000529355 DNAJC5GQ8N7S2 189 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 SLC30A5Q8TAD4 765 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 MED15Q96RN5 788 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 CNPPD1Q9BV87 410 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 SARGQ9BW04 601 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 AS3MTQ9HBK9 375 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 GALNT9Q9HCQ5 603 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 CHST12Q9NRB3 414 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 SACM1LQ9NTJ5 587 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 XPR1Q9UBH6 696 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 HESX1Q9UBX0 185 aa5.8□□□□□ -1.48
CTR9-204ENST00000529355 COL4A3Q01955 1670 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 A0A1W2PS29 197 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 GOLIM4O00461 696 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 PRC1O43663 620 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 PQBP1O60828 265 aaKnown RBP5.79□□□□□ -1.48
CTR9-204ENST00000529355 FOSP01100 380 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms