RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ADGRF2Q8IZF7 708 aa26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 SUSD3Q96L08 255 aa26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 GDF15Q99988 308 aa26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 COLEC11Q9BWP8 271 aa26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 UBE2OQ9C0C9 1292 aaKnown RBP26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 ELOVL4Q9GZR5 314 aa26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 BARX2Q9UMQ3 279 aaPredicted RBP26.4■■□□□ 1.82
LDLRAD3-203ENST00000528989 M0QZQ0 153 aa26.39■■□□□ 1.82
LDLRAD3-203ENST00000528989 CAPN15O75808 1086 aa26.39■■□□□ 1.82
LDLRAD3-203ENST00000528989 FERP16591 822 aa26.39■■□□□ 1.82
LDLRAD3-203ENST00000528989 FECHP22830 423 aa26.39■■□□□ 1.82
LDLRAD3-203ENST00000528989 MTF1Q14872 753 aa26.39■■□□□ 1.82
LDLRAD3-203ENST00000528989 B3GALT6Q96L58 329 aa26.39■■□□□ 1.82
LDLRAD3-203ENST00000528989 TACC1O75410 805 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 SERPING1P05155 500 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 LINC00271P0C7V0 271 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 GNL1P36915 607 aaPredicted RBP26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 CDR1P51861 262 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 ZNF132P52740 706 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 RAD23BP54727 409 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 TDRD12Q587J7 1177 aaKnown RBP26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 ZNF571Q7Z3V5 609 aaPredicted RBP26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 NOP9Q86U38 636 aaKnown RBP26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 SLC20A1Q8WUM9 679 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 LPIN3Q9BQK8 851 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 DPEP3Q9H4B8 488 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 CDH23Q9H251 3354 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 CYP11B1P15538 503 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 DPH6Q7L8W6 267 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 TAS1R1Q7RTX1 841 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 SLC4A11Q8NBS3 891 aa26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 NHEJ1Q9H9Q4 299 aaPredicted RBP26.38■■□□□ 1.81
LDLRAD3-203ENST00000528989 CHD7Q9P2D1 2997 aa26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 FAM170AA1A519 330 aa26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 SSTR3P32745 418 aaPredicted RBP26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 YWHAEP62258 255 aaKnown RBP26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 TAF3Q5VWG9 929 aa26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 EPS8L1Q8TE68 723 aa26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 ZSWIM1Q9BR11 485 aa26.37■■□□□ 1.81
LDLRAD3-203ENST00000528989 A8MXQ7 604 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 GABRDO14764 452 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 ODC1P11926 461 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 ACAT1P24752 427 aaKnown RBP26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 TKTP29401 623 aaKnown RBP26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 EIF4A3P38919 411 aaKnown RBP26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 PRKCIP41743 596 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 FAM171A1Q5VUB5 890 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 CYP26C1Q6V0L0 522 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 RAD9BQ6WBX8 426 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 ACOT1Q86TX2 421 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 FIBCD1Q8N539 461 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 COLGALT1Q8NBJ5 622 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 TMEM176AQ96HP8 235 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 IGSF21Q96ID5 467 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 SNX25Q9H3E2 840 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 PUF60Q9UHX1 559 aaKnown RBP26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 STXBP5LQ9Y2K9 1186 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 FUT10Q6P4F1 479 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 CEP57Q86XR8 500 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 C12orf29Q8N999 325 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 TFAP2BQ92481 460 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 ZNF558Q96NG5 402 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 VN1R3Q9BXE9 311 aa26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 NOCTQ9UK39 431 aaKnown RBP26.36■■□□□ 1.81
LDLRAD3-203ENST00000528989 ARHGEF15O94989 841 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 CFHP08603 1231 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 WARSP23381 471 aaKnown RBP26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 GNA15P30679 374 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 CDK17Q00537 523 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 CCDC142Q17RM4 750 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 KIAA0319Q5VV43 1072 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 SPRED2Q7Z698 418 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 TMTC1Q8IUR5 882 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 OLIG1Q8TAK6 271 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 DDX1Q92499 740 aaKnown RBP26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 RTP3Q9BQQ7 232 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 NT5C1AQ9BXI3 368 aa26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 DDX43Q9NXZ2 648 aaKnown RBP26.35■■□□□ 1.81
LDLRAD3-203ENST00000528989 CHD9Q3L8U1 2897 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 TRAPPC3O43617 180 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 ATP2C2O75185 946 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 CYP11A1P05108 521 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 SP7Q8TDD2 431 aaPredicted RBP26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 HEXIM2Q96MH2 286 aaKnown RBP26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 SYT11Q9BT88 431 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 ADAMTS1Q9UHI8 967 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 PCDHB8Q9UN66 801 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 MMEP08473 750 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 CCDC172P0C7W6 258 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 CHRNB2P17787 502 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 LAG3P18627 525 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 BRD2P25440 801 aaKnown RBP26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 ASTE1Q2TB18 679 aaPredicted RBP26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 SLC39A11Q8N1S5 342 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 TMEM86AQ8N2M4 240 aa26.34■■□□□ 1.81
LDLRAD3-203ENST00000528989 SF3B1O75533 1304 aaKnown RBP eCLIP26.33■■□□□ 1.814e-6■■■■■ 120.3
LDLRAD3-203ENST00000528989 CD19P15391 556 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 RGS19P49795 217 aa26.33■■□□□ 1.81
LDLRAD3-203ENST00000528989 PDE6CP51160 858 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms