RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SLFN12LQ6IEE8 588 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 ARID3BQ8IVW6 561 aaPredicted RBP16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 ATRIPQ8WXE1 791 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 POMGNT1Q8WZA1 660 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 FAM3CQ92520 227 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 DNAJC19Q96DA6 116 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 RMDN1Q96DB5 314 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 SEPT5Q99719 369 aaPredicted RBP16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 PYM1Q9BRP8 204 aaKnown RBP16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 GPR88Q9GZN0 384 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 ATXN3LQ9H3M9 355 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 SRPRBQ9Y5M8 271 aaKnown RBP16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 TICRRQ7Z2Z1 1910 aa16.8■□□□□ 0.28
CLNS1A-210ENST00000528364 ARNTLO00327 626 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 PPP1R37O75864 691 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 CYP11A1P05108 521 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 SYT1P21579 422 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 GABRR2P28476 465 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 MAGEA9P43362 315 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 DEPDC1BQ8WUY9 529 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 RUBCNQ92622 972 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 NELL1Q92832 810 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 SAAL1Q96ER3 474 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 ZFYVE19Q96K21 471 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 MRPL44Q9H9J2 332 aaKnown RBP16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 TRPV5Q9NQA5 729 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 ZSCAN32Q9NX65 697 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 C2CD2Q9Y426 696 aa16.79■□□□□ 0.28
CLNS1A-210ENST00000528364 A0A087X0B3 334 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 ATF6P18850 670 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 TAF6P49848 677 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 CASP5P51878 434 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 CYP4F8P98187 520 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 MGAT5BQ3V5L5 792 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 WDR44Q5JSH3 913 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 ZBTB44Q8NCP5 570 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 CHRDQ9H2X0 955 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 IL21Q9HBE4 155 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 PRMT8Q9NR22 394 aaPredicted RBP16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 RBM12Q9NTZ6 932 aaKnown RBP16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 TMLHEQ9NVH6 421 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
CLNS1A-210ENST00000528364 COL4A2P08572 1712 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 GOLGA8IPA6NC78 632 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 GOLGA8JA6NMD2 632 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 LILRB5O75023 590 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 CHRNB1P11230 501 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 IDEP14735 1019 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 PDCP20941 246 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 GAS6Q14393 721 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 POSTNQ15063 836 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 METTL23Q86XA0 190 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 THEM5Q8N1Q8 247 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 ACCSQ96QU6 501 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 USP28Q96RU2 1077 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 SMG9Q9H0W8 520 aaKnown RBP16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 PCDHGA2Q9Y5H1 932 aa16.77■□□□□ 0.28
CLNS1A-210ENST00000528364 KPNA7A9QM74 516 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 CHADO15335 359 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 GCNT3O95395 438 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 PRAMEF12O95522 483 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 HAPLN1P10915 354 aaPredicted RBP16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 TDGF1P13385 188 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 PAX3P23760 479 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 HOXC13P31276 330 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 ABCD1P33897 745 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 TUFMP49411 452 aaKnown RBP16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 GPR15P49685 360 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 KPNA1P52294 538 aaPredicted RBP16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 TFAMQ00059 246 aaKnown RBP16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 FCHO2Q0JRZ9 810 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 L1TD1Q5T7N2 865 aaKnown RBP16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 TXNDC11Q6PKC3 985 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 ITIH5Q86UX2 942 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 STKLD1Q8NE28 680 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 CSGALNACT1Q8TDX6 532 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 E2F7Q96AV8 911 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 HVCN1Q96D96 273 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 SLC46A2Q9BY10 475 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 PCIF1Q9H4Z3 704 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 GTSE1Q9NYZ3 720 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 DSEQ9UL01 958 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 MTMR6Q9Y217 621 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 TCHHQ07283 1943 aa16.76■□□□□ 0.27
CLNS1A-210ENST00000528364 TSC2P49815 1807 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 DPYSL4O14531 572 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms