RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ASB14A6NK59 587 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 EVPLLA8MZ36 301 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 LRRN2O75325 713 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SUPT20HL2P0C7V6 817 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF806P0C7X5 589 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 FCER1AP12319 257 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 WARSP23381 471 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TECP42680 631 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MAGEA2P43356 314 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 VSNL1P62760 191 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CXCL9Q07325 125 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MZT2BQ6NZ67 158 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TUBA3EQ6PEY2 450 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MSANTD1Q6ZTZ1 278 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ARMCX2Q7L311 632 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 LPCAT2Q7L5N7 544 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ANKRD23Q86SG2 305 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 RHPN2Q8IUC4 686 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 RDM1Q8NG50 284 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TBC1D16Q8TBP0 767 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF507Q8TCN5 953 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 RMND5BQ96G75 393 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MAGED4Q96JG8 741 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SMAD5Q99717 465 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CNPY3Q9BT09 278 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TSSK1BQ9BXA7 367 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 PRRG3Q9BZD7 231 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CYLDQ9NQC7 956 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 VPS54Q9P1Q0 977 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MTO1Q9Y2Z2 717 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 BCL9O00512 1426 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ABCC4O15439 1325 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 RGPD1P0DJD0 1748 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 A0A0G2JPF8 293 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 UBE2QL1A1L167 161 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SOWAHDA6NJG2 315 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 LRRC53A6NM62 1247 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 HNRNPCL3B7ZW38 293 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 HNRNPDLO14979 420 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 DYNC1LI2O43237 492 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 BNIP3LO60238 219 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 HNRNPCL4P0DMR1 293 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 GAP43P17677 238 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CHRNA3P32297 505 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TGFBR2P37173 567 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 PRELPP51888 382 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 FAPQ12884 760 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 STAT4Q14765 748 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MDH1BQ5I0G3 518 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TXNDC11Q6PKC3 985 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MTHFD1LQ6UB35 978 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CPXCR1Q8N123 301 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TTC29Q8NA56 475 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CLHC1Q8NHS4 586 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 P2RX5Q93086 422 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CCT8L2Q96SF2 557 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 NRBP2Q9NSY0 501 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SMARCAL1Q9NZC9 954 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF624Q9P2J8 865 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ING4Q9UNL4 249 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 PA2G4Q9UQ80 394 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 FAM187AA6NFU0 413 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 AIM2O14862 343 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CBFA2T3O75081 653 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SKAP2O75563 359 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 AGTP01019 485 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 RPLP2P05387 115 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 FEN1P39748 380 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 GPSM2P81274 684 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 STK4Q13043 487 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 BYSLQ13895 437 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 DGUOKQ16854 277 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 PMF1Q6P1K2 205 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 C17orf50Q8WW18 174 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ERP27Q96DN0 273 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 GLT1D1Q96MS3 346 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SRPK1Q96SB4 655 aaKnown RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 RERGLQ9H628 205 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ARPP21Q9UBL0 812 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CCDC182A6NF36 153 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 MEI4A8MW99 385 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ZBTB22O15209 634 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SNX4O95219 450 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 SLC25A27O95847 323 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CIITAP33076 1130 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 GUCA1AP43080 201 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 BTDP43251 543 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 NT5C2P49902 561 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TFCP2Q12800 502 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 ALFQ53S48 1182 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CDC73Q6P1J9 531 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 IZUMO1Q8IYV9 350 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 BLIDQ8IZY5 108 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 IL17REQ8NFR9 667 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 AGR3Q8TD06 166 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 APPBP2Q92624 585 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 C17orf80Q9BSJ5 609 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 TEKT3Q9BXF9 490 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms