RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PNOCQ13519 176 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 FAM187BQ17R55 369 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 ZC2HC1CQ53FD0 456 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-204ENST00000526430 RTP2Q5QGT7 225 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 SH3PXD2AQ5TCZ1 1133 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 NT5DC1Q5TFE4 455 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 DAB2IPQ5VWQ8 1189 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 PRSS55Q6UWB4 352 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-204ENST00000526430 PDZD3Q86UT5 571 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.5
NEDD8-204ENST00000526430 MCRS1Q96EZ8 462 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 DRC1Q96MC2 740 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
NEDD8-204ENST00000526430 GBP4Q96PP9 640 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 EDEM2Q9BV94 578 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 ST6GALNAC4Q9H4F1 302 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 ZFP14Q9HCL3 533 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 GPSM3Q9Y4H4 160 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 ABCA7Q8IZY2 2146 aa11.9□□□□□ -0.5
NEDD8-204ENST00000526430 TNRC6BQ9UPQ9 1833 aaKnown RBP11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 LRRIQ4A6NIV6 560 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 TSPAN1O60635 241 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 RPP40O75818 363 aaKnown RBP11.89□□□□□ -0.51
NEDD8-204ENST00000526430 STK4Q13043 487 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 GRM2Q14416 872 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PSMD5Q16401 504 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 SLC5A9Q2M3M2 681 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PDXDC1Q6P996 788 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 POTEHQ6S545 545 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 EPM2AIP1Q7L775 607 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-204ENST00000526430 HAUS6Q7Z4H7 955 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PROSER1Q86XN7 944 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 CEP57L1Q8IYX8 460 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 MYCT1Q8N699 235 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 DEPDC1BQ8WUY9 529 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 GAD1Q99259 594 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PTPRHQ9HD43 1115 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 OLFML3Q9NRN5 406 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 APC2O95996 2303 aa11.89□□□□□ -0.51
NEDD8-204ENST00000526430 TENM4Q6N022 2769 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 A0A1B0GUA9 196 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 ARNTLO00327 626 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 ACKR2O00590 384 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 KALRNO60229 2985 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 MICAL2O94851 1124 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 FAM13AO94988 1023 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 CAPNS1P04632 268 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 RHOP08100 348 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 PSMC3P17980 439 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 ARF4P18085 180 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-204ENST00000526430 BMP6P22004 513 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 CCNE1P24864 410 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 SCNN1GP51170 649 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 AMPD3Q01432 767 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 RAB33AQ14088 237 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 TFDP1Q14186 410 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 POSTNQ15063 836 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 PPP2R5AQ15172 486 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 SLC39A4Q6P5W5 647 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 LNX1Q8TBB1 728 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-204ENST00000526430 ZFP42Q96MM3 310 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 ASB16Q96NS5 453 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 LRRC27Q9C0I9 530 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 HAPLN2Q9GZV7 340 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 KMT5AQ9NQR1 393 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 MIOSQ9NXC5 875 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 TBC1D7Q9P0N9 293 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
NEDD8-204ENST00000526430 IPPQ9Y573 584 aa11.88□□□□□ -0.51
NEDD8-204ENST00000526430 ASXL3Q9C0F0 2248 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 C4orf47A7E2U8 309 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 ANKRD63C9JTQ0 380 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 K7ERI5 159 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 KRT18P05783 430 aaKnown RBP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 MYL1P05976 194 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 IDEP14735 1019 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 CEBPBP17676 345 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 GAP43P17677 238 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 PROZP22891 400 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 GDI1P31150 447 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 ASIC1P78348 528 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 GRIK3Q13003 919 aa11.87□□□□□ -0.51
NEDD8-204ENST00000526430 PCBP1Q15365 356 aaKnown RBP eCLIP11.87□□□□□ -0.51
NEDD8-204ENST00000526430 FAM78AQ5JUQ0 283 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms